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Published on: February 8, 2020
VHL protein alterations in sporadic renal cell carcinoma
J M Giménez-Bachs1, A S Salinas-Sánchez, F Sánchez-Sánchez
1Urology Department, Hospital and University Complex of Albacete, Albacete, Spain. gbjosem@sescam.jccm.es
Aims:
The vhl gene is a tumour suppressor gene implicated in renal tumorigenesis in both familial and sporadic renal cell carcinoma (RCC). Alterations in the gene may modify its suppressor function and allow the formation of renal tumours. The purpose of this study was to determine the existence of vhl gene mutations in renal tumour tissue among patients with sporadic RCC and to assess the effects on the structure of the VHL protein.
Materials And Methods:
This was an observational, analytical and descriptive study of 96 patients who had undergone surgery for sporadic RCC. In surgical specimens of tumour tissue, the three exons of the vhl gene were amplified by polymerase chain reaction and subjected to automatic sequencing. The consequences of the mutations detected on the VHL protein were analysed, taking into account the physical and chemical properties of the amino acids changed by the mutations, the location of the alterations in the protein sequence, the degree of conservation throughout evolution, and prediction of the secondary structure of the protein.
Results:
In total, 22 vhl gene mutations were detected in 21 (21.9%) patients; in particular, 13 exonic point mutations consisting of 11 sense mutations, one silent mutation and one missense mutation, plus five exon deletions and one insertion. The remaining three were intronic mutations. All changes occurred in protein functional domains and in regions that have been well conserved throughout evolution. Two-thirds of the intronic mutations were considered relevant for protein function. Among the mutations detected, 72.7% were considered capable of compromising the VHL protein suppressor function.
Conclusions:
Mutations in the vhl gene result in amino acid changes in the protein that usually occur at important functional sites that have been conserved throughout evolution and where the binding domains for other proteins are located and exert their suppressor function.
Insights
Mutations in the VHL gene were found in nearly 22% of sporadic renal cell carcinoma (RCC) patients, often compromising the VHL protein's tumor suppressor function and contributing to kidney tumor formation.
Area of Science:
- Genetics
- Oncology
- Molecular Biology
Background:
- The VHL gene acts as a tumor suppressor, crucial in preventing kidney cancer (renal cell carcinoma - RCC).
- Alterations in the VHL gene can impair its function, potentially leading to tumor development in sporadic RCC cases.
Purpose of the Study:
- To identify VHL gene mutations in tumor tissue from patients with sporadic RCC.
- To evaluate the impact of detected mutations on the VHL protein's structure and function.
Main Methods:
- Observational study of 96 sporadic RCC patients.
- Analysis of VHL gene exons (three) via PCR amplification and automated sequencing.
- Assessment of mutation effects on VHL protein, considering amino acid changes, location, conservation, and secondary structure predictions.
Main Results:
- 22 VHL gene mutations were identified in 21 patients (21.9%).
- Mutations included point mutations, deletions, and insertions, all affecting conserved functional domains.
- Approximately 72.7% of mutations were predicted to compromise the VHL protein's tumor suppressor activity.
Conclusions:
- VHL gene mutations lead to amino acid alterations within critical, evolutionarily conserved functional sites of the VHL protein.
- These changes impact protein binding domains, thereby disrupting its essential tumor suppressor function in sporadic RCC.
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