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Updated: Jul 11, 2026

Defining Gene Functions in Tumorigenesis by Ex vivo Ablation of Floxed Alleles in Malignant Peripheral Nerve Sheath Tumor Cells
Published on: August 25, 2021
Variable expression of Cre recombinase transgenes precludes reliable prediction of tissue-specific gene disruption by
Tim J Schulz1, Markus Glaubitz, Doreen Kuhlow
1University of Jena, Institute of Nutrition, Jena, Germany.
Abstract:
The Cre/loxP-system has become the system of choice for the generation of conditional so-called knockout mouse strains, i.e. the tissue-specific disruption of expression of a certain target gene. We here report the loss of expression of Cre recombinase in a transgenic mouse strain with increasing number of generations. This eventually led to the complete abrogation of gene expression of the inserted Cre cDNA while still being detectable at the genomic level. Conversely, loss of Cre expression caused an incomplete or even complete lack of disruption for the protein under investigation. As Cre expression in the tissue of interest in most cases cannot be addressed in vivo during the course of a study, our findings implicate the possibility that individual tail-biopsy genotypes may not necessarily indicate the presence or absence of gene disruption. This indicates that sustained post hoc analyses in regards to efficacy of disruption for every single study group member may be required.
Insights
Cre recombinase expression can be lost across generations in transgenic mice, leading to failed gene disruption. Genotyping alone may not confirm gene knockout efficacy, necessitating post hoc analysis.
Area of Science:
- Genetics
- Molecular Biology
- Transgenic Technology
Background:
- The Cre/loxP system is widely used for generating conditional knockout mouse models for tissue-specific gene disruption.
- Ensuring reliable Cre recombinase activity is crucial for the accurate generation of these models.
Purpose of the Study:
- To investigate the phenomenon of declining Cre recombinase expression in a transgenic mouse strain over successive generations.
- To determine the impact of diminished Cre expression on the efficacy of target gene disruption.
Main Methods:
- Utilized a transgenic mouse strain engineered for Cre/loxP-mediated gene disruption.
- Monitored Cre recombinase expression across multiple generations.
- Assessed target gene disruption at both the genomic and protein expression levels.
Main Results:
- Observed a progressive loss of Cre recombinase expression in the transgenic strain with increasing generations.
- Complete abrogation of Cre gene expression was detected at the molecular level, despite intact genomic DNA.
- This loss of Cre expression resulted in incomplete or absent disruption of the target gene.
Conclusions:
- Cre recombinase expression can be epigenetically silenced or otherwise lost in transgenic lines over time.
- Genomic analysis of Cre transgenes may not reliably predict functional gene disruption.
- Post hoc validation of target gene disruption is essential for all subjects in Cre/loxP studies to ensure experimental validity.
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