Flanking polyproline sequences inhibit beta-sheet structure in polyglutamine segments by inducing PPII-like helix
Gregory Darnell1, Joseph P R O Orgel, Reinhard Pahl
1Department of Biochemistry and Molecular Biology, University of Chicago, Chicago, IL 60637, USA.
Journal of Molecular Biology
|October 20, 2007
Summary
The polyproline (poly(P)) domain adjacent to polyglutamine (poly(Q)) tracts hinders beta-sheet amyloid fibril formation. This structural insight explains how poly(P) may protect against poly(Q) aggregation and related diseases.
Area of Science:
- Biochemistry
- Structural Biology
- Neuroscience
Background:
- Polyglutamine (poly(Q)) expansion in proteins like huntingtin causes amyloid fibril aggregation and neuronal toxicity, characteristic of Huntington's disease.
- A flanking polyproline (poly(P)) domain in huntingtin may mitigate poly(Q) aggregation and cytotoxicity.
Purpose of the Study:
- To investigate the structural impact of a C-terminal polyproline (poly(P)) domain on polyglutamine (poly(Q)) peptides.
- To elucidate the conformational changes and aggregation propensity of poly(Q) and poly(Q)-poly(P) peptides with varying glutamine lengths.
Main Methods:
- Synthesis of poly(Q) peptides (3-15 glutamine residues) and poly(Q)-poly(P) peptides.
- Circular dichroism (CD) spectroscopy to analyze secondary structure (PPII-like helix vs. beta-sheet).
- Size-exclusion chromatography (SEC) for oligomerization assessment.
- X-ray diffraction and electron microscopy for fibril formation analysis.
Main Results:
- Shorter poly(Q) peptides adopted PPII-like helices, while longer ones (>9 glutamine residues) formed beta-sheet structures and oligomers.
- Poly(Q)-poly(P) peptides predominantly maintained PPII-like structures, resisting beta-sheet formation and aggregation.
- The poly(P) domain significantly increased the threshold for fibril formation to approximately 15 glutamine residues.
Conclusions:
- Poly(Q) domains exhibit a conformational "tug-of-war" between PPII-like helices and aggregation-prone beta-sheets.
- The C-terminal poly(P) domain stabilizes a PPII-like conformation, opposing beta-sheet formation and aggregation.
- This conformational stabilization by poly(P) offers a structural basis for its protective role against poly(Q) aggregation and associated neurodegenerative diseases.
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