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Updated: Jul 10, 2026

Steady-state, Pre-steady-state, and Single-turnover Kinetic Measurement for DNA Glycosylase Activity
Published on: August 19, 2013
Oxanine DNA glycosylase activities in mammalian systems
Liang Dong1, Lisiane B Meira, Tapas K Hazra
1Department of Genetics and Biochemistry, South Carolina Experiment Station, Clemson University, Room 219, Biosystems Research Complex, 51 New Cherry Street, Clemson, SC 29634, United States.
Abstract:
DNA bases carrying an exocyclic amino group, namely adenine (A), guanine (G) and cytosine (C), encounter deamination under nitrosative stress. Oxanine (O), derived from deamination of guanine, is a cytotoxic and potentially mutagenic lesion and studies of its enzymatic repair are limited. Previously, we reported that the murine alkyladenine glycosylase (Aag) acts as an oxanine DNA glycosylase (JBC (2004), 279: 38177). Here, we report our recent findings on additional oxanine DNA glycosylase (ODG) activities in Aag knockout mouse tissues and other mammalian tissues. Analysis of the partially purified proteins from the mammalian cell extracts indicated the existence of ODG enzymes in addition to Aag. Data obtained from oxanine DNA cleavage assays using purified human glycosylases demonstrated that two known glycosylases, hNEIL1 and hSMUG1, contained weak but detectable ODG activities. ODG activity was the highest in hAAG and lowest in hSMUG1.
Insights
Oxanine, a cytotoxic DNA lesion from guanine deamination, is repaired by oxanine DNA glycosylase (ODG) enzymes. Research identified additional ODG activities in mammalian tissues beyond the known murine alkyladenine glycosylase (Aag).
Area of Science:
- Biochemistry
- Molecular Biology
- Genetics
Background:
- DNA bases like adenine, guanine, and cytosine can undergo deamination under nitrosative stress.
- Oxanine, a guanine deamination product, is a cytotoxic and potentially mutagenic DNA lesion.
- Enzymatic repair mechanisms for oxanine are not well-studied.
Purpose of the Study:
- To investigate additional oxanine DNA glycosylase (ODG) activities in mammalian tissues.
- To characterize the ODG activities of known human DNA glycosylases.
Main Methods:
- Analysis of partially purified proteins from mammalian cell extracts.
- Oxanine DNA cleavage assays using purified human glycosylases (hAAG, hNEIL1, hSMUG1).
Main Results:
- Additional ODG activities were detected in Aag knockout mouse tissues and other mammalian tissues.
- Partially purified proteins indicated the presence of ODG enzymes beyond Aag.
- Human glycosylases hNEIL1 and hSMUG1 showed weak but detectable ODG activities.
- hAAG exhibited the highest ODG activity, while hSMUG1 had the lowest.
Conclusions:
- Mammalian tissues possess ODG enzymes beyond Aag.
- hNEIL1 and hSMUG1 possess weak oxanine DNA glycosylase activity.
- hAAG is a significant ODG enzyme in human cells.
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