The PSF.p54nrb complex is a novel Mnk substrate that binds the mRNA for tumor necrosis factor alpha

Maria Buxadé1, Nick Morrice2, Danielle L Krebs3

  • 1Division of Molecular Physiology and the Dundee DD1 5EH, United Kingdom; Department of Biochemistry & Molecular Biology, University of British Columbia, 2350 Health Sciences Mall, Vancouver, British Columbia V6T 1Z3, Canada.

Insights

Researchers identified the PTB-associated splicing factor (PSF) as a novel substrate for MAP kinase signal-integrating kinases (Mnks). Mnk phosphorylation enhances PSF binding to tumor necrosis factor alpha mRNA, potentially regulating mRNA fate.

Area of Science:

  • Molecular Biology
  • Cell Biology
  • Proteomics

Background:

  • MAP kinase signal-integrating kinases (Mnks) interact with the translational machinery via the cap-binding initiation factor complex.
  • Identifying novel Mnk substrates is crucial for understanding kinase signaling pathways.

Purpose of the Study:

  • To identify new substrates of Mnks using a proteomic approach.
  • To investigate the functional consequence of Mnk phosphorylation on identified substrates.

Main Methods:

  • Proteomic analysis using cap resin to isolate interacting proteins.
  • In vitro kinase assays to test for Mnk phosphorylation.
  • In vivo studies to confirm substrate interaction and phosphorylation.
  • RNA immunoprecipitation assays to assess mRNA binding.

Main Results:

  • PTB-associated splicing factor (PSF) was identified as a novel Mnk substrate.
  • PSF is phosphorylated by Mnks at two sites both in vitro and in vivo.
  • PSF, along with p54(nrb), binds AU-rich element (ARE)-containing RNAs, including tumor necrosis factor alpha (TNFalpha) mRNA.
  • Mnk-mediated phosphorylation of PSF enhances its binding to TNFalpha mRNA.

Conclusions:

  • PSF is a novel substrate for Mnks.
  • Mnk-catalyzed phosphorylation of PSF regulates its binding to specific mRNAs like TNFalpha mRNA.
  • This phosphorylation may play a role in controlling the fate of inflammatory cytokine mRNAs.

Related Concept Videos

Regulation of Nuclear Protein Sorting01:45

Regulation of Nuclear Protein Sorting

Nuclear protein sorting regulates nucleus composition and gene expression, crucial for determining the fate of a eukaryotic cell. Hence, the entry and exit of molecules across the nuclear envelope is a tightly controlled process. Nuclear protein sorting can be inhibited by one of the following ways: 1) masking cargo signal sequences, 2) modifying the nuclear receptor's affinity for cargo, 3) controlling the nuclear pore size, 4) retaining the cargo during its transit to the cytosol or the...
Nuclear Export of mRNA02:31

Nuclear Export of mRNA

Before mRNAs are exported to the cytoplasm, it is crucial to check each mRNA for structural and functional integrity. Eukaryotic cells use several different mechanisms, collectively known as mRNA surveillance, to look for irregularities in mRNAs. Irregular or aberrant mRNA are rapidly degraded by various enzymes. If a defective mRNA escapes the surveillance, it would be translated into a protein which would either be non-functional or not function properly. One of the primary irregularities in...
NF-κB-dependent Signaling Pathway02:26

NF-κB-dependent Signaling Pathway

The transcription factor NF-κB was discovered in 1986 in the lab of Nobel laureate Professor David Baltimore, for its interaction with the immunoglobulin light chain enhancer in B-cells. After more than three decades of study, it is now evident that NF-κB regulates the expression of over 100 genes. Most of these genes play an essential role in the innate and adaptive immune responses as well as the inflammatory responses of animals.
NF-κB-dependent Signaling Mechanism
The heterodimer of NF-κB...
Nonsense-mediated mRNA Decay02:27

Nonsense-mediated mRNA Decay

The Upf proteins that carry out nonsense-mediated decay (NMD) are found in all eukaryotic organisms, including humans. Each protein has an individual role, but they need to work in collaboration. Upf1 is an ATP-dependent RNA helicase that unwinds the RNA helix. Because Upf1 can unwind any RNA, Upf2 and Upf3 are required to help Upf1 discriminate between nonsense and normal mRNAs.
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
PI3K/mTOR/AKT Signaling Pathway01:22

PI3K/mTOR/AKT Signaling Pathway

The mammalian target of rapamycin  (mTOR) is a serine/threonine kinase that regulates growth, proliferation, and cell survival in response to hormones, growth factors, or nutrient availability. This kinase exists in two structurally and functionally distinct forms: mTOR complex 1  (mTORC1) and mTOR complex 2  (mTORC2). The first form (mTORC1) is composed of a rapamycin-sensitive Raptor and proline-rich Akt substrate, PRAS40. In contrast,  mTORC2 consists of a rapamycin-insensitive companion...
Protein Complexes with Interchangeable Parts01:57

Protein Complexes with Interchangeable Parts

Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...