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Updated: Jul 10, 2026

An Improved Method to Isolate Mitochondrial Contact Sites
Published on: June 16, 2023
The peripheral membrane subunits of the SAM complex function codependently in mitochondrial outer membrane biogenesis
Nickie C Chan1, Trevor Lithgow
1Department of Biochemistry and Molecular Biology and Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Parkville, Victoria 3010, Australia.
Abstract:
The sorting and assembly machinery (SAM) complex functions in the assembly of beta-barrel proteins into the mitochondrial outer membrane. It is related to the Omp85/YaeT machinery in bacterial outer membranes, but the eukaryotic SAM complex is distinguished by two peripheral subunits, Sam37 and Sam35, that sit on the cytosolic face of the complex. The function of these subunits in beta-barrel protein assembly is currently unclear. By screening a library of sam35 mutants, we show that 13 distinct alleles were each specifically suppressed by overexpression of SAM37. Two of these mutants, sam35-409 and sam35-424, show distinct phenotypes that enable us to distinguish the function of Sam35 from that of Sam37. Sam35 is required for the SAM complex to bind outer membrane substrate proteins: destabilization of Sam35 inhibits substrate binding by Sam50. Sam37 acts later than Sam35, apparently to assist release of substrates from the SAM complex. Very different environments surround bacteria and mitochondria, and we discuss the role of Sam35 and Sam37 in terms of the problems peculiar to mitochondrial protein substrates.
Insights
The sorting and assembly machinery (SAM) complex
Area of Science:
- Mitochondrial biology
- Protein translocation
- Molecular machinery
Background:
- The sorting and assembly machinery (SAM) complex is crucial for inserting beta-barrel proteins into the mitochondrial outer membrane.
- The eukaryotic SAM complex has unique peripheral subunits, Sam35 and Sam37, whose functions in protein assembly remain largely unknown.
- These subunits are located on the cytosolic face of the SAM complex.
Purpose of the Study:
- To elucidate the distinct roles of Sam35 and Sam37 within the mitochondrial SAM complex.
- To understand how these subunits contribute to the assembly of beta-barrel proteins.
Main Methods:
- Screening a library of sam35 mutants to identify suppressors.
- Utilizing specific sam35 mutants (sam35-409 and sam35-424) to differentiate subunit functions.
- Analyzing substrate binding and release by the SAM complex.
Main Results:
- Overexpression of SAM37 suppressed 13 distinct sam35 mutant alleles.
- Sam35 is essential for the SAM complex's ability to bind outer membrane substrate proteins, with its destabilization inhibiting Sam50-mediated binding.
- Sam37 functions downstream of Sam35, potentially aiding in the release of substrates from the SAM complex.
Conclusions:
- Sam35 and Sam37 play sequential and distinct roles in the mitochondrial SAM complex.
- Sam35 facilitates substrate recognition and binding, while Sam37 assists in substrate release.
- These findings provide insights into the specialized mechanisms of mitochondrial protein import compared to bacterial systems.
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