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Updated: Jul 10, 2026

Gastric Mucosa Quantitative Polymerase Chain Reaction Analysis for Detecting Helicobacter pylori and Antibiotic Resistance
Published on: March 7, 2025
Primary resistance in Helicobacter pylori isolated in children from Iran
Mandana Rafeey1, Reza Ghotaslou, Solmaz Nikvash
1Liver and Gastrointestinal Diseases Research Center, Tabriz University of Medical Sciences, Tabriz, Iran. mrafeey@yahoo.com
Insights
Helicobacter pylori resistance is alarmingly high in Iranian children, especially to metronidazole and amoxicillin. This study highlights the urgent need for updated antimicrobial treatment regimens for H. pylori infections in this population.
Area of Science:
- Pediatric Infectious Diseases
- Microbiology
- Gastroenterology
Background:
- Helicobacter pylori infection is prevalent in Iran, yet antimicrobial susceptibility data for pediatric eradication regimens are scarce.
- Understanding local resistance patterns is crucial for effective H. pylori treatment strategies in children.
Purpose of the Study:
- To determine the antimicrobial resistance rates of H. pylori strains isolated from Iranian children.
- To evaluate susceptibility to six key antimicrobials used in H. pylori eradication.
- To recommend an updated, effective anti-H. pylori treatment regimen for pediatric patients in Iran.
Main Methods:
- Prospective collection of 100 H. pylori strains from children undergoing gastroscopy (2003-2005).
- Antimicrobial susceptibility testing using E test and disk diffusion methods for six agents.
- Collection of demographic data and clinical presentation, including abdominal pain.
Main Results:
- Extremely high resistance rates observed: 95% to metronidazole, 59% to amoxicillin.
- Moderate resistance to clarithromycin (16%), low resistance to furazolidone (9%), ciprofloxacin (7%), and tetracycline (5%).
- No significant differences in resistance based on age, sex, or clinical presentation.
Conclusions:
- Iranian children exhibit very high H. pylori resistance to metronidazole and amoxicillin, necessitating treatment regimen revision.
- Clarithromycin resistance is moderate, while ciprofloxacin and tetracycline show low resistance.
- Updated treatment guidelines incorporating current susceptibility data are essential for successful H. pylori eradication in pediatric populations.
Abstract:
Helicobacter pylori-associated infection is extremely common in Iran, as in other developing countries, but few data exist on the susceptibility of H. pylori to antimicrobials commonly used in the eradication schedules in this country. This study was performed to determine the resistance rate to six antimicrobial agents used in the treatment of H. pylori infection in dyspeptic Iranian children and to recommend an updated anti-H. pylori treatment regimen to use in children. All H. pylori isolated from children who were undergoing gastroscopy were prospectively collected and subcultured to yield their susceptibility to six antimicrobial agents, by E test and disk diffusion methods. Demographic data and presenting symptoms were also collected. A prospective study was carried out from January 2003 to January 2005 with 100 strains of H. pylori isolated from children (40 girls and 60 boys; age range, 1.5 to 16 years [mean, 9.22 +/- 3.25 years]); the strains had been successfully subcultured to yield antimicrobial sensitivity. Overall the H. pylori resistance rate was 95% to metronidazole, 59% to amoxicillin, 16% to clarithromycin, 9% to furazolidone, 7% to ciprofloxacin, and 5% to tetracycline. The most common presenting symptom was abdominal pain. There were no statistically significant differences in antimicrobial resistance rates related to age, sex, or clinical presentation. In the Iranian children, the prevalence of H. pylori resistance was very high to metronidazole and amoxicillin, moderate to clarithromycin, and low to ciprofloxacin and tetracycline.
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