Related Experiment Video
Updated: Jul 10, 2026

Visualization of DNA Repair Proteins Interaction by Immunofluorescence
Published on: June 26, 2020
Mismatch Repair proteins are recruited to replicating DNA through interaction with Proliferating Cell Nuclear Antigen
Prerna Jasmine Masih1, Dimiter Kunnev, Thomas Melendy
1Department of Cellular and Molecular Biology, Roswell Park Cancer Institute, Buffalo, NY 14214, USA.
Abstract:
Mismatch Repair (MMR) is closely linked to DNA replication; however, other than the role of the replicative sliding clamp (PCNA) in various MMR functions, the linkage between DNA replication and MMR has been difficult to investigate. Here we use an in vitro DNA replication system based on simian virus 40, to investigate MMR recruitment to replicating DNA. Both DNA replication and MMR proteins are recruited to replicating DNA in an origin-dependent fashion. Primer synthesis is required for recruitment of both PCNA and MMR proteins, but not for recruitment of the single-stranded DNA-binding protein (RPA). Blocking PCNA recruitment to replicating DNA with a p21-based polypeptide blocks PCNA and MMR, but not RPA recruitment. Once PCNA and subsequent proteins required for replication are loaded onto DNA, addition of p21 leaves PCNA on the replicating DNA, but actively displaces MMR proteins. These findings indicate that the MMR machinery is recruited to replicating DNA through its interaction with PCNA, and suggests that this occurs via binding of the MMR proteins to the multi-protein interaction sites on PCNA. These studies demonstrate the utility of this system for further investigation of the role of DNA replication in MMR.
Insights
DNA replication machinery recruits mismatch repair (MMR) proteins via the PCNA sliding clamp. This interaction is essential for MMR to function during DNA replication, as shown in a novel in vitro system.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- DNA replication and mismatch repair (MMR) are critical cellular processes.
- The precise mechanisms linking DNA replication and MMR, beyond the involvement of the replicative sliding clamp (PCNA), remain challenging to study.
- Investigating this linkage is crucial for understanding genome stability.
Purpose of the Study:
- To investigate the recruitment of MMR proteins to replicating DNA using an in vitro system.
- To elucidate the role of PCNA in mediating the interaction between DNA replication and MMR.
- To understand the origin-dependent nature of MMR recruitment during replication.
Main Methods:
- Utilized a simian virus 40 (SV40)-based in vitro DNA replication system.
- Employed a p21-based polypeptide to block PCNA recruitment.
- Analyzed the recruitment of MMR proteins, PCNA, and RPA (single-stranded DNA-binding protein) to replicating DNA.
Main Results:
- Both DNA replication and MMR proteins are recruited to replicating DNA in an origin-dependent manner.
- Primer synthesis is necessary for the recruitment of PCNA and MMR proteins, but not RPA.
- Blocking PCNA recruitment prevents PCNA and MMR protein recruitment, while addition of p21 after PCNA loading displaces MMR proteins but not PCNA.
Conclusions:
- MMR machinery is recruited to replicating DNA through interactions with PCNA.
- MMR protein binding to PCNA's multi-protein interaction sites is suggested as the mechanism.
- The SV40 in vitro system is effective for studying the role of DNA replication in MMR.
Related Concept Videos
Mismatch Repair
The Mutator Protein Family Plays a Key Role in DNA Mismatch Repair
The human genome has more than 3 billion base pairs of DNA per cell. Prior to cell division, that vast amount of genetic...
Mismatch Repair
Mismatch Repair
Homologous Recombination
DNA Damage can Stall the Cell Cycle
DNA Damage Can Stall the Cell Cycle
