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Published on: November 22, 2019
Automatic synchronization and distribution of biological databases and software over low-bandwidth networks among
Unitsa Sangket1, Amornrat Phongdara, Wilaiwan Chotigeat
1Center for Genomics and Bioinformatics Research, Prince of Songkla University, Thailand. usangket@yahoo.com
This study shows that BitTorrent-based Peer-to-Peer (btP2P) file distribution significantly speeds up biological data sharing in developing Asia-Pacific countries. This technology offers a reliable solution for synchronizing large databases over low-bandwidth networks.
Area of Science:
- Bioinformatics and computational biotechnology
- Information-based biotechnology applications
Background:
- Developing countries in the Asia-Pacific face challenges with limited computational infrastructure and network bandwidth for bioinformatics.
- Existing File Transfer Protocol (FTP) methods are insufficient for efficiently distributing large biological datasets.
Purpose of the Study:
- To assess the effectiveness of a BitTorrent-based Peer-to-Peer (btP2P) file distribution model for biological data synchronization.
- To evaluate btP2P performance in developing countries with low-bandwidth networks.
Main Methods:
- Implemented a btP2P network with initial nodes in Thailand, Korea, and Singapore.
- Compared download performance of btP2P against conventional File Transfer Protocol (FTP).
- Assessed the reliability of btP2P for distributing multi-gigabyte biological databases.
Main Results:
- btP2P achieved three times faster overall download performance compared to FTP.
- Demonstrated reliable dissemination of continuously growing biological databases across participating countries.
- Identified potential for further performance improvement by expanding the network with more international nodes.
Conclusions:
- btP2P technology is suitable for automatic synchronization and distribution of biological databases and software.
- The model is particularly effective for developing countries with low-bandwidth network constraints.
- Expanding the btP2P network can enhance data dissemination efficiency in the Asia-Pacific region.
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