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Updated: Jul 9, 2026

Quantitative Detection of DNA-Protein Crosslinks and Their Post-Translational Modifications
Published on: April 21, 2023
Protein damage by reactive electrophiles: targets and consequences
1Department of Biochemistry, Vanderbilt University School of Medicine,, Nashville, Tennessee 37232, USA. daniel.liebler@vanderbilt.edu
Abstract:
It has been 60 years since the Millers first described the covalent binding of carcinogens to tissue proteins. Protein covalent binding was gradually overshadowed by the emergence of DNA adduct formation as the dominant paradigm in chemical carcinogenesis but re-emerged in the early 1970s as a critical mechanism of drug and chemical toxicity. Technology limitations hampered the characterization of protein adducts until the emergence of mass spectrometry-based proteomics in the late 1990s. The time since then has seen rapid progress in the characterization of the protein targets of electrophiles and the consequences of protein damage. Recent integration of novel affinity chemistries for electrophile probes, shotgun proteomics methods, and systems modeling tools has led to the identification of hundreds of protein targets of electrophiles in mammalian systems. The technology now exists to map the targets of damage to critical components of signaling pathways and metabolic networks and to understand mechanisms of damage at a systems level. The implementation of sensitive, specific analyses for protein adducts from both xenobiotic-derived and endogenous electrophiles offers a means to link protein damage to clinically relevant health effects of both chemical exposures and disease processes.
Insights
Protein covalent binding, once overlooked, is now a key focus in understanding chemical toxicity. Advanced proteomics techniques allow scientists to identify protein targets of electrophiles and link this damage to health effects.
Area of Science:
- Toxicology and Molecular Biology
- Chemical Carcinogenesis and Drug Toxicity
Background:
- Protein covalent binding by carcinogens was first described 60 years ago.
- Initially overshadowed by DNA adducts, protein binding re-emerged as crucial for drug and chemical toxicity in the 1970s.
- Technological limitations in characterizing protein adducts were overcome by mass spectrometry-based proteomics in the late 1990s.
Purpose of the Study:
- To review the progress in characterizing protein targets of electrophiles and the consequences of protein damage.
- To highlight the current technological capabilities for mapping electrophile damage.
- To emphasize the link between protein adducts and clinically relevant health effects.
Main Methods:
- Integration of novel affinity chemistries for electrophile probes.
- Application of shotgun proteomics methods.
- Utilization of systems modeling tools for analysis.
Main Results:
- Identification of hundreds of protein targets for electrophiles in mammalian systems.
- Capability to map damage to critical signaling pathways and metabolic networks.
- Understanding of damage mechanisms at a systems level.
Conclusions:
- Sensitive and specific analyses for protein adducts are now available.
- These analyses can link damage from xenobiotic and endogenous electrophiles to health outcomes.
- This approach offers a means to connect chemical exposures and disease processes to clinical health effects.
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