Related Experiment Video
Updated: Jul 9, 2026

Using In Vitro Fluorescence Resonance Energy Transfer to Study the Dynamics Of Protein Complexes at a Millisecond Time Scale
Published on: March 14, 2019
A UAF1-containing multisubunit protein complex regulates the Fanconi anemia pathway
Martin A Cohn1, Przemyslaw Kowal, Kailin Yang
1Department of Radiation Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA 02115, USA.
The deubiquitinating enzyme USP1, crucial for DNA repair, is activated by its partner UAF1. DNA damage reduces USP1 levels, impacting this key repair pathway.
Area of Science:
- Molecular Biology
- Biochemistry
- Genetics
Background:
- The deubiquitinating enzyme USP1 regulates Ub-FANCD2 levels, a critical protein in the Fanconi anemia DNA repair pathway.
- Understanding USP1 regulation is vital for comprehending DNA damage response mechanisms.
Purpose of the Study:
- To investigate the regulatory mechanisms of USP1 activity.
- To identify and characterize proteins that interact with USP1.
- To elucidate the role of USP1 in DNA repair.
Main Methods:
- Purification of the USP1 multisubunit protein complex from HeLa cells.
- In vitro reconstitution assays using Ub-AMC and monoubiquitinated FANCD2.
- Analysis of USP1 gene transcription following DNA damage.
Main Results:
- A USP1-associated factor 1 (UAF1) protein was identified as a stoichiometric component of the USP1 complex.
- UAF1 acts as an activator of USP1 deubiquitinating activity, increasing catalytic turnover but not substrate affinity.
- DNA damage triggers rapid transcriptional shutoff of the USP1 gene, reducing USP1/UAF1 complex levels.
Conclusions:
- UAF1 is a critical activator of USP1, enhancing its catalytic efficiency.
- The cellular levels of the USP1/UAF1 complex are dynamically regulated by DNA damage through transcriptional control.
- These findings reveal a novel regulatory mechanism for USP1 and its role in DNA repair.
Related Concept Videos
Protein Complexes with Interchangeable Parts
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...
Protein Complexes with Interchangeable Parts
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...
Anaphase Promoting Complex
Anaphase Promoting Complex
The ADP/ATP Carrier Protein
Protein Complex Assembly
Many viruses self-assemble into a fully functional unit using the infected host cell to...

