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Protein Complexes with Interchangeable Parts01:57

Protein Complexes with Interchangeable Parts

Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...
Protein Complexes with Interchangeable Parts01:57

Protein Complexes with Interchangeable Parts

Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...
Vesicular Tubular Clusters01:45

Vesicular Tubular Clusters

After budding out from the ER membrane, some COPII vesicles lose their coat and fuse with one another to form larger vesicles and interconnected tubules called vesicular tubular clusters or VTCs. These clusters constitute a compartment at the ER-Golgi interface known as ERGIC (Endoplasmic Reticulum Golgi Intermediate Compartment). The ERGIC is a mobile membrane-bound cargo transport system that sorts proteins secreted from ER and delivers them to the Golgi.
With the help of motor proteins such...
RNA Splicing01:32

RNA Splicing

Splicing is the process by which eukaryotic RNA is edited before its translation into protein. The RNA strand transcribed from eukaryotic DNA is called the primary transcript. The primary transcripts that become mRNAs are called precursor messenger RNAs (pre-mRNAs). Eukaryotic pre-mRNA contains alternating sequences of exons and introns. Exons are nucleotide sequences that code for proteins, whereas introns are the non-coding regions. In RNA splicing, introns are removed and exons are bonded...
RNA Splicing01:32

RNA Splicing

Splicing is the process by which eukaryotic RNA is edited before its translation into protein. The RNA strand transcribed from eukaryotic DNA is called the primary transcript. The primary transcripts that become mRNAs are called precursor messenger RNAs (pre-mRNAs). Eukaryotic pre-mRNA contains alternating sequences of exons and introns. Exons are nucleotide sequences that code for proteins, whereas introns are the non-coding regions. In RNA splicing, introns are removed and exons are bonded...
Spin–Spin Coupling: Three-Bond Coupling (Vicinal Coupling)01:22

Spin–Spin Coupling: Three-Bond Coupling (Vicinal Coupling)

Vicinal or three-bond coupling is commonly observed between protons attached to adjacent carbons. Here, nuclear spin information is primarily transferred via electron spin interactions between adjacent C‑H bond orbitals. This generally favors the antiparallel arrangement of spins, so 3J values are usually positive.
The extent of coupling depends on the C‑C bond length, the two H‑C‑C angles, any electron-withdrawing substituents, and the dihedral angle between the involved orbitals. The...

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Related Experiment Video

Updated: Jul 9, 2026

Utilization of Grafix for the Detection of Transient Interactors of Saccharomyces cerevisiae Spliceosome Subcomplexes
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Subunit organization and functional transitions in Ci-VSP.

Susy C Kohout1, Maximilian H Ulbrich, Sarah C Bell

  • 1Department of Molecular and Cell Biology, University of California, Berkeley, California 94720, USA.

Nature Structural & Molecular Biology
|December 18, 2007
PubMed
Summary

Voltage-sensing domains (VSDs) are key to membrane protein function. Researchers found the phosphatase Ci-VSP is a single-subunit protein that operates independently, yet exhibits voltage-dependent structural changes.

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Area of Science:

  • Molecular biology
  • Biophysics
  • Membrane protein structure and function

Background:

  • Voltage-sensing domains (VSDs) regulate effector domains in membrane proteins.
  • Ion channels typically utilize four VSDs to control pore gating.
  • The subunit stoichiometry of the phosphatase Ci-VSP remained undetermined.

Purpose of the Study:

  • To determine the subunit number of the phosphatase Ci-VSP.
  • To investigate the operational mechanism and conformational dynamics of Ci-VSP.
  • To elucidate the role of VSDs in Ci-VSP function.

Main Methods:

  • Single-molecule microscopy was employed for subunit counting.
  • Voltage clamp fluorometry was utilized to detect structural dynamics.
  • Biophysical techniques were combined to analyze protein behavior.

Main Results:

  • Ci-VSP was identified as a monomeric protein.
  • The phosphatase operates independently, not requiring multiple subunits.
  • Multiple voltage-dependent conformational transitions were observed in Ci-VSP.

Conclusions:

  • Ci-VSP functions as an independent monomeric unit.
  • Despite its monomeric nature, Ci-VSP exhibits complex voltage-dependent behavior.
  • This finding advances understanding of VSDs in non-channel membrane proteins.