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Published on: August 8, 2022
Novel truncating mutations of the CHM gene in Chinese patients with choroideremia
Shea Ping Yip1, Tsz Shan Cheung, Man Yu Chu
1Department of Health Technology and Informatics, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong SAR, China. shea.ping.yip@polyu.edu.hk
Purpose:
Choroideremia (CHM) is an X-linked retinal degenerative disorder caused by mutations in the CHM gene. The mutations result in malfunction of the Rab escort protein 1 (REP-1). In this study, mutational analysis of the CHM gene was performed on five Chinese families clinically diagnosed with CHM.
Methods:
Denaturing high performance liquid chromatography was used for mutation screening for all 15 exons and flanking intron regions of the CHM gene. Mutations were confirmed and characterized with DNA sequencing. Second samples were later collected for extraction of mRNA and proteins from leukocytes. A non-radioactive protein truncation test (PTT) was developed and used to characterize the truncating nature of the mutations. Immunoblot analysis of proteins extracted from leukocytes was also performed.
Results:
Five mutations were identified in these five families, each with one distinct mutation: three frameshift, one nonsense, and one splicing. Two of these were novel mutations: c.627dupA in exon 5 and c.703-1G>C in intron 5. The truncating nature of the mutations was experimentally proved by PTT for four families with second samples collected. In particular, c.703-1G>C spliced exon 5 directly to exon 7 and deleted the entire exon 6 from the transcript. Direct immunoblot analysis failed to detect REP-1 in males affected by CHM, but demonstrated its presence in female carriers and homozygous normal females.
Conclusions:
This is the first study reporting mutations in the CHM gene in Chinese families. Mutational analysis was performed at the DNA, mRNA and protein levels. Five truncating mutations were found, and two of these were novel.
Insights
This study identified five truncating mutations in the CHM gene in Chinese families with choroideremia (CHM), including two novel mutations. These genetic alterations disrupt Rab escort protein 1 (REP-1) function, leading to retinal degeneration.
Area of Science:
- Genetics
- Ophthalmology
- Molecular Biology
Background:
- Choroideremia (CHM) is an X-linked retinal degenerative disorder.
- Mutations in the CHM gene cause CHM by affecting Rab escort protein 1 (REP-1) function.
Purpose of the Study:
- To perform mutational analysis of the CHM gene in five Chinese families diagnosed with choroideremia.
- To identify and characterize mutations in the CHM gene at DNA, mRNA, and protein levels.
Main Methods:
- Mutation screening using denaturing high-performance liquid chromatography and DNA sequencing.
- mRNA and protein analysis using protein truncation test (PTT) and immunoblotting.
- Characterization of mutations affecting gene splicing and protein expression.
Main Results:
- Five distinct truncating mutations were identified in five families, including two novel mutations (c.627dupA and c.703-1G>C).
- The mutation c.703-1G>C caused aberrant splicing, skipping exon 6.
- REP-1 protein was undetectable in affected males but present in female carriers and normal females.
Conclusions:
- This study reports the first mutational analysis of the CHM gene in Chinese families.
- Five truncating CHM mutations were identified, with two being novel.
- The findings provide insights into the genetic basis of choroideremia in the Chinese population.
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