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Updated: Jul 8, 2026

Protocol for Human Blastoids Modeling Blastocyst Development and Implantation
Published on: August 10, 2022
Regulation of blastocyst stage gene expression and outgrowth interferon tau activity of somatic cell clone aggregates
Satoshi Kurosaka1, Sigrid Eckardt, Alan D Ealy
1Center for Animal Transgenesis and Germ Cell Research, University of Pennsylvania, Kennett Square, Pennsylvania 19348, USA.
Abstract:
The inefficiency of mammalian somatic cell cloning is associated with abnormal gene expression presumably caused by errors in reprogramming of the transplanted genome. In the mouse, aggregation of four-cell stage clones leads to an improvement of both gene expression and development. To determine whether clone-clone aggregation at postgenomic activation stages influences gene expression in bovine clones, we profiled, in single and aggregated embryos at the blastocyst stage, expression of developmentally relevant genes namely Oct4, Dnmt1, Dnmt3, Glut1, Glut3, and a housekeeping gene, Poly(A) polymerase (PolyA) by real-time RT-PCR. Compared to embryos generated by in vitro fertilization (IVF), individual clones more frequently exhibited transcript levels that were more than twofold higher or lower than the average value of IVF embryos. This was observed less often in clone aggregates for Oct4, Dnmt1, Dnmt3, and PolyA, but not for Glut1 and Glut3. The analysis of interferon tau bioactivity as a marker of trophectoderm function in blastocyst outgrowths showed that both single clones and clone aggregates have less extraembryonic potential in vitro compared to IVF embryos, with no apparent consequence of aggregation. These findings indicate that aggregation of bovine clones with each other at later cleavage stages can change gene expression patterns at preimplantation stages, but does not rescue trophectoderm function in vitro.
Insights
Bovine clone aggregation at the blastocyst stage partially corrects abnormal gene expression but does not improve trophectoderm function. This suggests aggregation impacts gene regulation but not overall developmental potential in cloned embryos.
Area of Science:
- * Reproductive biology
- * Developmental biology
- * Genetics
Background:
- * Mammalian somatic cell cloning exhibits inefficiencies linked to abnormal gene expression due to reprogramming errors.
- * In mice, aggregating four-cell stage clones improves gene expression and development.
- * The impact of clone aggregation at later developmental stages on bovine embryos remains unclear.
Purpose of the Study:
- * To investigate if aggregating bovine clones at the blastocyst stage influences gene expression.
- * To assess the effect of clone aggregation on trophectoderm function as a marker of developmental potential.
Main Methods:
- * Profiling gene expression (Oct4, Dnmt1, Dnmt3, Glut1, Glut3, PolyA) in single and aggregated bovine cloned embryos at the blastocyst stage using real-time RT-PCR.
- * Comparing gene expression patterns to in vitro fertilization (IVF) embryos.
- * Analyzing interferon tau bioactivity in blastocyst outgrowths to evaluate trophectoderm function.
Main Results:
- * Individual bovine clones showed more frequent significant deviations in gene expression compared to IVF embryos.
- * Aggregation reduced these deviations for Oct4, Dnmt1, Dnmt3, and PolyA, but not Glut1 or Glut3.
- * Both single clones and aggregates exhibited reduced in vitro extraembryonic potential compared to IVF embryos, with no benefit from aggregation.
Conclusions:
- * Aggregating bovine clones at the blastocyst stage alters preimplantation gene expression patterns.
- * Clone aggregation does not rescue impaired trophectoderm function in vitro.
- * Later stage aggregation may partially correct gene expression but does not fully restore developmental potential in bovine clones.
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