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Updated: Jul 8, 2026

Isolation of Cognate RNA-protein Complexes from Cells Using Oligonucleotide-directed Elution
Published on: January 16, 2017
c-Jun supports ribosomal RNA processing and nucleolar localization of RNA helicase DDX21
Tim H Holmström1, Antoine Mialon, Marko Kallio
1Centre for Biotechnology, University of Turku and Abo Akademi University, 20520 Turku, Finland.
Abstract:
The molecular mechanisms by which the AP-1 transcription factor c-Jun exerts its biological functions are not clearly understood. In addition to its well established role in transcriptional regulation of gene expression, several reports have suggested that c-Jun may also regulate cell behavior by non-transcriptional mechanisms. Here, we report that small interfering RNA-mediated depletion of c-Jun from mammalian cells results in inhibition of 28 S and 18 S rRNA accumulation. Moreover, we show that c-Jun depletion results in partial translocation of RNA helicase DDX21, implicated in rRNA processing, from the nucleolus to the nucleoplasm. We demonstrate that DDX21 translocation is rescued by exogenous c-Jun expression and that c-Jun depletion inhibits rRNA binding of DDX21. Furthermore, the direct interaction between c-Jun and DDX21 regulates nucleolar localization of DDX21. These results demonstrate that in addition to its transcriptional effects, c-Jun regulates rRNA processing and nucleolar compartmentalization of the rRNA processing protein DDX21. Thus, our results demonstrate a nucleolar mechanism through which c-Jun can regulate cell behavior. Moreover, these results suggest that the phenotypes observed previously in c-Jun-depleted mouse models and cell lines could be partly due to the effects of c-Jun on rRNA processing.
Insights
The transcription factor c-Jun regulates cell behavior through non-transcriptional mechanisms. It controls rRNA processing and DDX21 protein localization within the nucleolus.
Area of Science:
- Molecular Biology
- Cell Biology
- Gene Regulation
Background:
- The transcription factor c-Jun (AP-1) is known for regulating gene expression.
- Emerging evidence suggests c-Jun also influences cell behavior via non-transcriptional pathways.
- The precise non-transcriptional roles of c-Jun remain largely unelucidated.
Purpose of the Study:
- To investigate the non-transcriptional mechanisms of c-Jun.
- To determine c-Jun's role in ribosomal RNA (rRNA) processing.
- To explore c-Jun's interaction with RNA helicase DDX21.
Main Methods:
- Small interfering RNA (siRNA) was used to deplete c-Jun in mammalian cells.
- Cellular localization of DDX21 was assessed using microscopy.
- rRNA accumulation and DDX21 binding were quantified.
- Exogenous c-Jun expression was used to rescue phenotypes.
Main Results:
- c-Jun depletion inhibited 28S and 18S rRNA accumulation.
- c-Jun depletion caused DDX21 to translocate from the nucleolus to the nucleoplasm.
- Exogenous c-Jun expression rescued DDX21 translocation and restored rRNA binding.
- Direct interaction between c-Jun and DDX21 was shown to regulate DDX21 nucleolar localization.
Conclusions:
- c-Jun plays a crucial role in rRNA processing and DDX21 nucleolar localization.
- A novel nucleolar mechanism for c-Jun-mediated regulation of cell behavior is identified.
- Observed phenotypes in c-Jun-depleted models may be partly attributed to impaired rRNA processing.
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