Search research articles

ABOUT JoVE

Overview Leadership Blog JoVE Help Center

AUTHORS

Publishing Process Editorial Board Scope & Policies Peer Review FAQ Submit

LIBRARIANS

Testimonials Subscriptions Access Resources Library Advisory Board FAQ

RESEARCH

JoVE Journal Methods Collections JoVE Encyclopedia of Experiments Archive

EDUCATION

JoVE Core JoVE Business JoVE Science Education JoVE Lab Manual Faculty Resource Center Faculty Site

Terms & Conditions of Use

Related Concept Videos

Modern Molecular Taxonomy

Modern Molecular Taxonomy

Advancements in molecular biology have revolutionized the identification and characterization of bacteria, with multiple methods leveraging DNA sequencing for enhanced precision. As sequencing technologies improve and costs decline, these approaches are increasingly used in clinical, environmental, and evolutionary studies.Multilocus Sequence Typing (MLST) examines several housekeeping genes, essential chromosomal genes encoding cellular functions, to distinguish strains. Approximately...

Applications of Molecular Taxonomy

Applications of Molecular Taxonomy

Molecular taxonomy has revolutionized the understanding and classification of bacteria, providing precise insights into their diversity, evolutionary relationships, and ecological roles. By utilizing molecular techniques such as DNA sequencing and fingerprinting, researchers have made significant strides in various fields related to bacterial studies.Resolving Taxonomic AmbiguitiesMolecular taxonomy has been instrumental in distinguishing closely related bacterial species initially thought to...

IP3/DAG Signaling Pathway

IP3/DAG Signaling Pathway

Membrane lipids such as phosphatidylinositol (PI) are precursors for several membrane-bound and soluble second messengers. Specific kinases phosphorylate PI and produce phosphorylated inositol phospholipids. One such inositol phospholipids are the phosphatidylinositol-4,5 bisphosphate [PI(4,5)P2], present in the inner half of the lipid bilayer. Upon ligand binding, GPCR stimulates Gq proteins to turn on phospholipase Cꞵ. Activated phospholipase Cꞵ cleaves PI(4,5)P2 and produces two-second...

Globular and Fibrous Proteins

Globular and Fibrous Proteins

Many proteins can be classified into two distinct subtypes - globular or fibrous. These two types differ in their shapes and solubilities.
Globular proteins are also known as spheroproteins and typically are approximately round in shape. They contain a mix of amino acid types and contain differing sequences in their primary structures. Globular proteins have many different functions, such as enzymes, cellular messengers, and molecular transporters. These roles often require the proteins to be...

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by

Same author

Quantification and In Silico Toxicity Assessment of Tazarotene and its Impurities for a Quality and Safe Drug Product Development.

Journal of chromatographic science·2019

Same author

Synthesis, Characterization, and Biological Activities of Pendant Arm-Pyridyltetrazole Copper(II) Complexes: DNA Binding/Cleavage Activity and Cytotoxic Studies.

Chemistry & biodiversity·2015

Same author

Effect of dielectric constant on protonation equlibria of L-dopa and 1, 10 -phenanthroline in dioxan-water mixtures.

Acta chimica Slovenica·2013

Same author

Chemical speciation of binary complexes of embelin with some biologically important metal ions.

Acta chimica Slovenica·2013

Same author

Influence of dielectric constant on protonation equilibria of L-aspartic Acid in acetonitrile- and ethylene glycol-water mixtures.

Acta chimica Slovenica·2013

Same author

MIC database: a collection of antimicrobial compounds from literature.

Bioinformation·2010

Search research articles

Related Experiment Video

Updated: Jul 8, 2026

Navigating MARRVEL, a Web-Based Tool that Integrates Human Genomics and Model Organism Genetics Information

Navigating MARRVEL, a Web-Based Tool that Integrates Human Genomics and Model Organism Genetics Information

Published on: August 15, 2019

DoD2007: 1082 molecular biology databases.

Padavala Ajay Babu¹, Juttada Udyama, Rajam Kiran Kumar

¹ProGene Biosciences, Institute of Bioinformatics and Research Centre, 103, Bharat Towers, Dwaraka Nagar, Visakhapatnam. ajay_pgb@progenebio.in

|January 12, 2008

Summary

This summary is machine-generated.

The Database of Databases (DoD2007) integrates biological data with a user-friendly interface, offering access to 1082 databases. This resource aids researchers by simplifying data discovery and integration in molecular biology.

Keywords:

data integration database javascript molecular biology

More Related Videos

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease

Published on: April 4, 2018

Development of Compendium for Esophageal Squamous Cell Carcinoma

Development of Compendium for Esophageal Squamous Cell Carcinoma

Published on: April 12, 2024

Related Experiment Videos

Last Updated: Jul 8, 2026

Navigating MARRVEL, a Web-Based Tool that Integrates Human Genomics and Model Organism Genetics Information

Navigating MARRVEL, a Web-Based Tool that Integrates Human Genomics and Model Organism Genetics Information

Published on: August 15, 2019

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease

Published on: April 4, 2018

Development of Compendium for Esophageal Squamous Cell Carcinoma

Development of Compendium for Esophageal Squamous Cell Carcinoma

Published on: April 12, 2024

Area of Science:

Molecular Biology
Bioinformatics
Computational Biology

Background:

Numerous molecular biology databases exist, offering varied access to biological data.
Data integration challenges arise due to architectural similarities and specializations among databases.

Purpose of the Study:

To present the Database of Databases (DoD2007) as a partial solution for biological data integration.
To provide a centralized, searchable resource for accessing diverse molecular biology databases.

Main Methods:

Developed using HTML and JavaScript.
Features a web-based user interface with global and specific database search functionalities.
Incorporates keyword help and direct links to abstracts, full-text articles, and database home pages.

Main Results:

The DoD2007 release includes 15 categories and links to 1082 databases.
Features 209 new database entries, marked with a '+' sign.
Data primarily sourced from Nucleic Acids Research and other published resources.

Conclusions:

The DoD2007 facilitates improved access and integration of molecular biology resources.
The database serves as a valuable tool for researchers navigating the landscape of biological information.