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Determination of Crystal Structures01:29

Determination of Crystal Structures

In the late 1800s, the revelation that light extended beyond visible wavelengths led to the discovery of X-rays by Wilhelm Roentgen. Recognized as high-energy electromagnetic radiation with short wavelengths, X-rays prompted exploration into their interaction with crystals. Max von Laue proposed in 1912 that the periodic arrangement of atoms, ions, or molecules in crystals would cause them to diffract X-rays, a hypothesis confirmed through experiments with copper sulfate and zinc sulfide...
Crystal Growth: Principles of Crystallization01:25

Crystal Growth: Principles of Crystallization

Crystallization is a phase transformation process in which crystals are precipitated from a supersaturated solution or formed from other sources. During crystallization, atoms or molecules arrange themselves into a well-defined, rigid crystal lattice to minimize energy.
Initiating crystallization involves manipulating the concentration of the solute and the temperature of the solution. Since crystal growth occurs when the ratio of concentration and solubility of the solute in the solvent – the...
X-ray Crystallography02:18

X-ray Crystallography

The size of the unit cell and the arrangement of atoms in a crystal may be determined from measurements of the diffraction of X-rays by the crystal, termed X-ray crystallography.
Diffraction
Diffraction is the change in the direction of travel experienced by an electromagnetic wave when it encounters a physical barrier whose dimensions are comparable to those of the wavelength of the light. X-rays are electromagnetic radiation with wavelengths about as long as the distance between neighboring...
Crystal Field Theory - Octahedral Complexes02:58

Crystal Field Theory - Octahedral Complexes

Crystal Field Theory
To explain the observed behavior of transition metal complexes (such as colors), a model involving electrostatic interactions between the electrons from the ligands and the electrons in the unhybridized d orbitals of the central metal atom has been developed. This electrostatic model is crystal field theory (CFT). It helps to understand, interpret, and predict the colors, magnetic behavior, and some structures of coordination compounds of transition metals.
CFT focuses on...
Imperfections in Crystal Structure: Stoichiometric Point Defects01:26

Imperfections in Crystal Structure: Stoichiometric Point Defects

Schottky defects arise when some lattice points in a crystal, such as those in NaCl, remain unoccupied, creating lattice vacancies without disturbing the overall electrical neutrality of the crystal. This defect is common in ionic crystals where the positive and negative ions are similar in size, as seen in sodium chloride and cesium chloride. The presence of Schottky defects enables the crystal to conduct electricity to a small extent through an ionic mechanism. Electric fields cause nearby...
Crystal Field Theory - Tetrahedral and Square Planar Complexes02:46

Crystal Field Theory - Tetrahedral and Square Planar Complexes

Tetrahedral Complexes
Crystal field theory (CFT) is applicable to molecules in geometries other than octahedral. In octahedral complexes, the lobes of the dx2−y2 and dz2 orbitals point directly at the ligands. For tetrahedral complexes, the d orbitals remain in place, but with only four ligands located between the axes. None of the orbitals points directly at the tetrahedral ligands. However, the dx2−y2 and dz2 orbitals (along the Cartesian axes) overlap with the ligands less than the dxy,...

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Related Experiment Video

Updated: Jul 8, 2026

Atom Probe Tomography Studies on the Cu(In,Ga)Se2 Grain Boundaries
09:51

Atom Probe Tomography Studies on the Cu(In,Ga)Se2 Grain Boundaries

Published on: April 22, 2013

Guanine crystals: a first principles study.

F Ortmann1, K Hannewald, F Bechstedt

  • 1European Theoretical Spectroscopy Facility, Institut für Festkörpertheorie und -optik, Friedrich-Schiller-Universität, Max-Wien-Platz 1, 07743 Jena, Germany.

The Journal of Physical Chemistry. B
|January 17, 2008
PubMed
Summary
This summary is machine-generated.

Density functional theory reveals how water affects guanine crystals. Guanine

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Construction and Systematical Symmetric Studies of a Series of Supramolecular Clusters with Binary or Ternary Ammonium Triphenylacetates
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Construction and Systematical Symmetric Studies of a Series of Supramolecular Clusters with Binary or Ternary Ammonium Triphenylacetates

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ABCG5/G8 Crystallization in a Lipidic Bicelle Environment for X-Ray Crystallography
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ABCG5/G8 Crystallization in a Lipidic Bicelle Environment for X-Ray Crystallography

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Last Updated: Jul 8, 2026

Atom Probe Tomography Studies on the Cu(In,Ga)Se2 Grain Boundaries
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Published on: April 22, 2013

Construction and Systematical Symmetric Studies of a Series of Supramolecular Clusters with Binary or Ternary Ammonium Triphenylacetates
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ABCG5/G8 Crystallization in a Lipidic Bicelle Environment for X-Ray Crystallography
06:47

ABCG5/G8 Crystallization in a Lipidic Bicelle Environment for X-Ray Crystallography

Published on: August 25, 2023

Area of Science:

  • Computational materials science
  • Solid-state physics
  • Quantum chemistry

Background:

  • Guanine is a fundamental component of DNA and RNA.
  • Understanding guanine crystal properties is crucial for molecular electronics and biomaterials.
  • The influence of water on crystalline organic materials is not fully understood.

Purpose of the Study:

  • To investigate the ground state, dynamic, and electronic properties of guanine crystals using first-principles calculations.
  • To elucidate the specific effects of water molecules on guanine's structural, vibrational, and electronic characteristics.
  • To explore the implications for charge transport in organic molecular crystals.

Main Methods:

  • Density Functional Theory (DFT) calculations.
  • Analysis of structural, vibrational (phonon frequencies), and electronic properties.
  • Comparison with gas-phase calculations and experimental data.

Main Results:

  • Water molecules significantly alter guanine crystal's structural and vibrational properties.
  • Predicted phonon frequencies for intermolecular and intramolecular lattice vibrations.
  • HOMO states form a dispersive band (0.83 eV bandwidth) in the pi-pi stacking direction, impacting charge transport.

Conclusions:

  • Water incorporation influences guanine crystal properties.
  • The electronic band structure suggests potential for charge transport in layered organic crystals.
  • DFT provides a powerful tool for studying complex molecular crystals.