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Updated: Jul 7, 2026

High-resolution Structural Magnetic Resonance Imaging of the Human Subcortex In Vivo and Postmortem
Published on: December 30, 2015
Magnetic resonance imaging of cortical connectivity in vivo
S Canals1, M Beyerlein1, A L Keller1
1Max Planck Institute for Biological Cybernetics, 72076 Tübingen, Germany.
Abstract:
Magnetic resonance imaging of neuronal connectivity in vivo opens up the possibility of performing longitudinal investigations on neuronal networks. This is one main reason for the attention that paramagnetic ion manganese (Mn2+) has attracted as a potential anterograde neuronal tracer for MRI experiments. However, the correct and possibly repeated use of this tracer--or of any tracer for that matter, including heavy metals--requires the development of an administration strategy that minimizes its toxic effects. Here we first investigated the conditions that maximize the tracing efficiency of Mn2+ and preserve viability and tissue architectonics in combined MRI and histology experiments in rats. We demonstrate that most common protocols for neuronal tract tracing using Mn2+ result in large neuronal and glial lesions. The toxicity of manganese is distinct during intracortical injections and blocks the transfer of the tracer. After optimizing the technique, we could show that extensive cortical connectivity maps can be generated, with no sign of neuronal damage. Importantly, preservation of tissue viability improves the efficiency of Mn2+ in tracing neuronal connections. We have successfully used this technique to trace corticofugal somatosensory and motor pathways in individual animals and describe a connectivity index (CnI) based on Mn2+ transport that quantitatively reveals cortical heterogeneities in interhemispheric communication. Finally, we have significantly improved the resolution of the technique by continuously infusing very low concentrations of Mn2+ into the target area using osmotic pumps coupled to chronically implanted brain cannulae. The specific, nontoxic and quantitative nature of the neuronal tracings described here indicates the value of this tracer for chronic studies of development and plasticity as well as for studies of brain pathology.
Insights
Researchers optimized manganese (Mn2+) tracing for magnetic resonance imaging (MRI) of neuronal connectivity. This improved method minimizes toxicity, enabling detailed, non-damaging mapping of brain networks for chronic studies.
Area of Science:
- Neuroscience
- Neuroimaging
- Biomedical Engineering
Background:
- Magnetic resonance imaging (MRI) enables in vivo investigation of neuronal connectivity and longitudinal studies of neural networks.
- Paramagnetic manganese ion (Mn2+) is a promising anterograde neuronal tracer for MRI, but its toxicity requires careful administration strategies.
Purpose of the Study:
- To investigate conditions maximizing Mn2+ tracing efficiency while preserving tissue viability and architectonics for MRI.
- To develop a non-toxic, high-resolution Mn2+ administration technique for detailed neuronal connectivity mapping.
Main Methods:
- Experiments in rats combining MRI and histology to assess Mn2+ toxicity and tracing efficiency under various administration protocols.
- Optimization of Mn2+ injection and infusion techniques, including continuous low-concentration infusion via osmotic pumps and chronically implanted cannulae.
- Development of a connectivity index (CnI) based on Mn2+ transport for quantitative analysis of interhemispheric communication.
Main Results:
- Common Mn2+ tract tracing protocols cause significant neuronal and glial lesions, hindering tracer transfer.
- Optimized Mn2+ administration significantly improved tracing efficiency, enabling extensive cortical connectivity mapping without neuronal damage.
- Continuous low-dose Mn2+ infusion via osmotic pumps substantially enhanced technique resolution.
Conclusions:
- Optimized Mn2+ administration is crucial for effective and safe neuronal tracing in MRI studies.
- This non-toxic, quantitative Mn2+ tracing technique is valuable for chronic studies of brain development, plasticity, and pathology.
- The developed method allows for detailed mapping of neuronal pathways, such as corticofugal somatosensory and motor pathways.
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