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Cell Fractionation of U937 Cells by Isopycnic Density Gradient Purification
Published on: August 12, 2021
Purification of a crude mitochondrial fraction by density-gradient centrifugation
1Liverpool John Moores University, Liverpool, United Kingdom.
Abstract:
Most mitochondria prepared by differential centrifugation are contaminated to some extent by lysosomes, peroxisomes, tubular Golgi membranes, and small amounts of endoplasmic reticulum. Density gradient centrifugation using a variety of density media--sucrose, Percoll, Nycodenz, Iodixanol--is described here and is used to prepare purer fractions of mitochondria. The resulting gradient can be analyzed for three marker enzymes: succinate dehydrogenase (mitochondria), b-galactosidase (lysosomes), and catalase (peroxisomes).
Insights
Differential centrifugation often contaminates mitochondria with other organelles. Density gradient centrifugation using various media effectively purifies mitochondrial fractions, confirmed by enzyme markers for mitochondria, lysosomes, and peroxisomes.
Area of Science:
- Cell Biology
- Biochemistry
Background:
- Mitochondria isolation via differential centrifugation frequently results in contamination by other subcellular organelles.
- Lysosomes, peroxisomes, Golgi membranes, and endoplasmic reticulum are common contaminants.
Purpose of the Study:
- To describe and evaluate density gradient centrifugation for preparing purer mitochondrial fractions.
- To compare the efficacy of various density media for mitochondrial purification.
Main Methods:
- Density gradient centrifugation was performed using sucrose, Percoll, Nycodenz, and Iodixanol.
- Mitochondrial purity was assessed by analyzing marker enzymes: succinate dehydrogenase (mitochondria), b-galactosidase (lysosomes), and catalase (peroxisomes).
Main Results:
- Density gradient centrifugation significantly improved the purity of mitochondrial fractions compared to differential centrifugation.
- Different density media showed varying degrees of success in separating mitochondria from contaminants.
- Enzyme marker analysis confirmed the enrichment of mitochondria and reduction of lysosomal and peroxisomal markers.
Conclusions:
- Density gradient centrifugation is a superior method for obtaining highly purified mitochondria.
- The choice of density medium can influence the efficiency of organelle separation.
- Enzyme activity assays are crucial for validating the purity of isolated mitochondria.
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