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Updated: Jul 7, 2026

Cloud-Based Phrase Mining and Analysis of User-Defined Phrase-Category Association in Biomedical Publications
Published on: February 23, 2019
Assisted curation: does text mining really help?
Beatrice Alex1, Claire Grover, Barry Haddow
1School of Informatics, University of Edinburgh, EH8 9LW, UK. balex@inf.ed.ac.uk
Abstract:
Although text mining shows considerable promise as a tool for supporting the curation of biomedical text, there is little concrete evidence as to its effectiveness. We report on three experiments measuring the extent to which curation can be speeded up with assistance from Natural Language Processing (NLP), together with subjective feedback from curators on the usability of a curation tool that integrates NLP hypotheses for protein-protein interactions (PPIs). In our curation scenario, we found that a maximum speed-up of 1/3 in curation time can be expected if NLP output is perfectly accurate. The preference of one curator for consistent NLP output and output with high recall needs to be confirmed in a larger study with several curators.
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