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Published on: October 21, 2021
The stochastic dynamics of filopodial growth
Yueheng Lan1, Garegin A Papoian
1Department of Chemistry, University of North Carolina, Chapel Hill, North Carolina, USA.
Abstract:
A filopodium is a cytoplasmic projection, exquisitely built and regulated, which extends from the leading edge of the migrating cell, exploring the cell's neighborhood. Commonly, filopodia grow and retract after their initiation, exhibiting rich dynamical behaviors. We model the growth of a filopodium based on a stochastic description which incorporates mechanical, physical, and biochemical components. Our model provides a full stochastic treatment of the actin monomer diffusion and polymerization of each individual actin filament under stress of the fluctuating membrane. We investigated the length distribution of individual filaments in a growing filopodium and studied how it depends on various physical parameters. The distribution of filament lengths turned out to be narrow, which we explained by the negative feedback created by the membrane load and monomeric G-actin gradient. We also discovered that filopodial growth is strongly diminished upon increasing retrograde flow, suggesting that regulating the retrograde flow rate would be a highly efficient way to control filopodial extension dynamics. The filopodial length increases as the membrane fluctuations decrease, which we attributed to the unequal loading of the membrane force among individual filaments, which, in turn, results in larger average polymerization rates. We also observed significant diffusional noise of G-actin monomers, which leads to smaller G-actin flux along the filopodial tube compared with the prediction using the diffusion equation. Overall, partial cancellation of these two fluctuation effects allows a simple mean field model to rationalize most of our simulation results. However, fast fluctuations significantly renormalize the mean field model parameters. The biological significance of our filopodial model and avenues for future development are also discussed.
Insights
We developed a stochastic model for filopodium growth, revealing that membrane mechanics and actin dynamics create narrow filament length distributions. Controlling retrograde flow is key to regulating filopodium extension.
Area of Science:
- Cell Biology
- Biophysics
- Computational Biology
Background:
- Filopodia are dynamic cellular protrusions crucial for cell migration and exploration.
- Their growth and retraction involve complex mechanical, physical, and biochemical processes.
- Understanding filopodial dynamics requires sophisticated modeling approaches.
Purpose of the Study:
- To develop a comprehensive stochastic model for filopodium growth.
- To investigate the influence of physical parameters on actin filament length distribution.
- To explore the relationship between membrane fluctuations, retrograde flow, and filopodial extension.
Main Methods:
- Stochastic modeling of actin monomer diffusion and polymerization.
- Incorporation of mechanical forces from the fluctuating cell membrane.
- Analysis of individual actin filament dynamics within a growing filopodium.
Main Results:
- Filament length distribution is narrow due to negative feedback from membrane load and G-actin gradients.
- Filopodial growth is significantly reduced by increased retrograde flow.
- Decreased membrane fluctuations lead to increased filopodial length due to unequal force distribution.
Conclusions:
- The model accurately captures filopodial dynamics, highlighting the interplay of stochasticity and feedback mechanisms.
- Retrograde flow regulation emerges as a critical factor for controlling filopodial extension.
- Further research can refine the model and explore its implications for cell migration.
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