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Related Concept Videos

DNA Topoisomerases02:02

DNA Topoisomerases

Topoisomerases are enzymes that relax overwound DNA molecules during various cell processes, including DNA replication and transcription. These enzymes regulate positive and negative DNA supercoiling without changing the nucleotide sequence. DNA overwinding in a clockwise direction results in positively supercoiled DNA, whereas underwinding in a counterclockwise direction produces negatively supercoiled DNA.
Types and Mechanism of action
Topoisomerases are divided into two main types.  Type I...
DNA as a Genetic Template02:05

DNA as a Genetic Template

Two structural features of the DNA molecule provide a basis for the mechanisms of heredity: the four nucleotide bases and its double-stranded nature. The Watson-Crick model of double-helical DNA structure, proposed in 1952, drew heavily upon the X-ray crystallography work of researchers Rosalind Franklin and Maurice Wilkins. Watson, Crick, and Wilkins jointly received the Nobel Prize in Physiology or Medicine for their work in 1962. Franklin was, controversially, excluded from the prize for...
DNA Helicases00:55

DNA Helicases

DNA unwinding helicase enzymes are a type of motor protein. Motor proteins can translocate along filaments or polymers using energy generated from ATP hydrolysis. Helicases are involved in all the important cellular processes where DNA unwinding is required, such as DNA replication, repair, recombination, and transcription. They are present in all living organisms, but vary in their structure, function, and mechanism of action. For example, in prokaryotes, DnaB helicase binds and translocates...
Single-Strand DNA Binding Proteins01:03

Single-Strand DNA Binding Proteins

For successful DNA replication, the unwinding of double-stranded DNA must be accompanied by stabilization and protection of the separated single strands of the DNA. This crucial task is performed by single-strand DNA-binding (SSB) proteins. They bind to the DNA in a sequence-independent manner, which means that the nitrogenous bases of the DNA need not be present in a specific order for binding of SSB proteins to it. The binding of SSB proteins straightens single-stranded DNA (ssDNA) and makes...
Forces Acting on Chromosomes02:11

Forces Acting on Chromosomes

During mitosis, chromosome movements occur through the interplay of multiple piconewton level forces. In prometaphase, these forces help in chromosome assembly or congression at the equatorial plane, eventually leading to their alignment at the metaphase plate. The forces acting on the chromosomes are space and time-dependent; therefore, they vary with the position of the chromosomes as the cell progresses through mitosis. 
Microtubules and motor proteins exert two types of forces on...
Forces Acting on Chromosomes02:11

Forces Acting on Chromosomes

During mitosis, chromosome movements occur through the interplay of multiple piconewton level forces. In prometaphase, these forces help in chromosome assembly or congression at the equatorial plane, eventually leading to their alignment at the metaphase plate. The forces acting on the chromosomes are space and time-dependent; therefore, they vary with the position of the chromosomes as the cell progresses through mitosis. 
Microtubules and motor proteins exert two types of forces on...

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Related Experiment Video

Updated: Jul 7, 2026

DNA Nanotubes as a Versatile Tool to Study Semiflexible Polymers
08:00

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Published on: October 25, 2017

Force-induced structural transitions in cross-linked DNA films.

A André1, F Fontaine-Vive, H M Möller

  • 1Universität Konstanz, Fachbereich Physik, 78457, Konstanz, Germany.

European Biophysics Journal : EBJ
|February 1, 2008
PubMed
Summary
This summary is machine-generated.

Formaldehyde treatment creates cross-links in sodium DNA films, enabling a transition to elastomeric behavior. Stretching these films under humidity reveals unique structural changes, suggesting extended base-pair stacking in DNA.

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Area of Science:

  • Biomaterials Science
  • Polymer Chemistry
  • Molecular Biology

Background:

  • Sodium DNA films are a promising biomaterial.
  • Understanding DNA's mechanical properties is crucial for applications.
  • Formaldehyde is a known cross-linking agent.

Purpose of the Study:

  • To investigate the effects of formaldehyde-induced cross-linking on sodium DNA films.
  • To characterize the structural and mechanical changes in DNA films after cross-linking and stretching.
  • To explore potential novel DNA conformations.

Main Methods:

  • Wet-spinning of sodium DNA films.
  • Formaldehyde treatment for cross-linking.
  • Raman spectroscopy to determine DNA conformation (B form).
  • Mechanical stretching experiments to assess plastic vs. elastomeric behavior.
  • X-ray diffraction under high humidity to analyze molecular orientation and structure.

Main Results:

  • Moderately cross-linked DNA films predominantly exhibit the B conformation.
  • Increased formaldehyde exposure induces a transition from plastic to elastomeric behavior.
  • Stretching elastomeric DNA films under high humidity leads to molecular orientation.
  • Unique meridional reflections (7.4-7.8 and 8.2 Å) observed upon stretching, not seen in classical DNA forms.

Conclusions:

  • Formaldehyde cross-linking significantly alters DNA film mechanics, inducing elastomeric properties.
  • The observed X-ray diffraction patterns suggest a novel, extended DNA structure formed under tension.
  • These findings open possibilities for engineered DNA-based materials with tunable mechanical responses.