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Published on: September 11, 2020
Nasopharyngeal carriage of Streptococcus pneumoniae in Gambian infants: a longitudinal study
Philip C Hill1, Yin Bun Cheung, Abiodun Akisanya
1Bacterial Diseases Programme, MRC Laboratories, Banjul, The Gambia. pandmhill@hotmail.com
Insights
All Gambian infants carried Streptococcus pneumoniae, with carriage duration varying by serotype. This data is crucial for assessing the impact of new pneumococcal conjugate vaccines in Africa.
Area of Science:
- Microbiology
- Epidemiology
- Vaccinology
Background:
- Nasopharyngeal carriage of Streptococcus pneumoniae (pneumococcus) is a key factor in disease transmission.
- Understanding carriage dynamics is essential for the effective implementation of pneumococcal conjugate vaccines (PCVs).
Purpose of the Study:
- To establish baseline data on pneumococcal carriage in Gambian infants prior to the introduction of a restricted valency PCV.
- To analyze the time to acquisition and duration of carriage for different pneumococcal serotypes.
Main Methods:
- A cohort of 236 infants in The Gambia was followed for one year.
- Nasopharyngeal swabs were collected at birth, bi-monthly for six months, and then bi-monthly until one year of age.
- Time to acquisition and duration of carriage were analyzed based on pneumococcal serotype.
Main Results:
- All infants acquired Streptococcus pneumoniae carriage during the study period.
- Sixty-five serotypes were identified, with the top 5 accounting for 51% of isolates.
- While acquisition rates did not differ significantly between serotypes or vaccine groups, carriage duration varied significantly, with non-vaccine types carried for shorter durations than vaccine types.
Conclusions:
- This study provides critical baseline data on pneumococcal carriage dynamics in Gambian infants.
- The findings are vital for evaluating the future impact of pneumococcal conjugate vaccine introduction in The Gambia and other African regions.
- Understanding serotype-specific carriage duration is important for vaccine effectiveness assessments.
Background:
To prepare for national introduction of a pneumococcal conjugate vaccine of restricted valency, we studied nasopharyngeal carriage of Streptococcus pneumoniae in Gambian infants.
Methods:
We studied 236 infants in 21 villages. We collected nasopharyngeal swab samples at birth, twice per month for 6 months, and every second month until 1 year of age. We studied time to acquisition and duration of pneumococcal carriage according to serotype.
Results:
All infants carried S. pneumoniae at some point. Sixty-five serotypes were found, and the 5 most common serotypes (6B, 19F, 6A, 14, and 23F) accounted for 51% of isolates. The mean age at first acquisition of carriage was 33 days (95% confidence interval, 29-36 days). There were no significant differences in acquisition rates between the 6 most common serotypes (P = .067) or between vaccine serotypes, vaccine-related serotypes, or nonvaccine serotypes (P = .317). However, the duration of carriage differed significantly between the 6 most common serotypes (P = .004). The rate of reacquisition of carriage and the duration of carriage did not differ significantly between the 6 most common serotypes (P = .229 and P = .669 respectively). However, nonvaccine types were acquired faster (P = .004) and were carried for a shorter duration (P < .001) than were vaccine serotypes. A previous episode of serotype 14 carriage was associated with delayed reacquisition of this serotype (P = .005) and longer duration of carriage (P = .017).
Conclusions:
The data provided in this study regarding time to acquisition and duration of pneumococcal carriage in Gambian infants provide an important baseline for evaluating the impact of the introduction of a pneumococcal conjugate vaccine in The Gambia and elsewhere in Africa.
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