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Updated: Jul 7, 2026

Isolation and Identification of Waterborne Antibiotic-Resistant Bacteria and Molecular Characterization of their Antibiotic Resistance Genes
Published on: March 3, 2023
erm(B)-carrying elements in tetracycline-resistant pneumococci and correspondence between Tn1545 and Tn6003
Ileana Cochetti1, Emily Tili, Marina Mingoia
1Institute of Microbiology and Biomedical Sciences, Polytechnic University of Marche Medical School, Via Tronto 10/A, 60020 Ancona, Italy.
Abstract:
This study investigated the genetic organization of erm(B)-carrying transposons of Streptococcus pneumoniae and their distribution in tetracycline-resistant clinical isolates. By comparatively analyzing reference pneumococci carrying erm(B)/tet(M) transposon Tn1545, Tn6003, Tn6002, or Tn3872, we demonstrated a substantial correspondence between Tn1545 and Tn6003, which have the same resistance gene combination [tet(M) (tetracycline), erm(B) (erythromycin), and aphA-3 (kanamycin)]; share the macrolide-aminoglycoside-streptothricin element, containing a second erm(B); and only differ by a ca. 1.2-kb insertion (containing a putative IS1239 insertion sequence) detected in Tn1545 from S. pneumoniae reference strain BM4200. These results enabled elucidation of the structure of Tn1545, the first erm(B)-carrying transposon described in S. pneumoniae. A collection of 83 erythromycin- and tetracycline-resistant clinical pneumococci, representative of recent Italian isolates carrying erm(B) as the sole erythromycin resistance gene, was used to investigate the distribution of the different transposons. All 83 organisms were positive for tet(M) and bore an erm(B)/tet(M) transposon that could be characterized by using a specific set of primer pairs; Tn3872 was detected in 18 isolates, Tn6002 in 59 isolates, and Tn6003 in 6 (the sole kanamycin-resistant) isolates. The genetic organization of transposon Tn1545, with its specific insertion, was not detected in any of the isolates tested. The erm(B)-carrying elements of tetracycline-resistant pneumococci substantially corresponded to those [bearing a silent tet(M) gene] recently detected in tetracycline-susceptible pneumococci. Overall, in erm(B)-positive pneumococci, Tn6003 was the least common erm(B)-carrying Tn916-related element and Tn6002 the most common.
Insights
This study details erm(B)-carrying transposons in Streptococcus pneumoniae, finding Tn6002 is the most common among resistant clinical isolates, while Tn1545 was not detected. This clarifies the genetic landscape of antibiotic resistance in pneumococci.
Area of Science:
- Microbiology
- Genetics
- Molecular Biology
Background:
- Erythromycin resistance in Streptococcus pneumoniae is often mediated by the erm(B) gene.
- The genetic elements carrying erm(B) and their prevalence in clinical isolates are crucial for understanding resistance.
- Tetracycline resistance, mediated by tet(M), frequently co-occurs with erm(B) in pneumococci.
Purpose of the Study:
- To investigate the genetic organization of erm(B)-carrying transposons in Streptococcus pneumoniae.
- To determine the distribution of specific erm(B)/tet(M) transposons (Tn1545, Tn6003, Tn6002, Tn3872) in tetracycline-resistant clinical isolates.
- To elucidate the structural relationship between Tn1545 and other related transposons.
Main Methods:
- Comparative analysis of reference pneumococci strains carrying different erm(B)/tet(M) transposons.
- Characterization of transposons in 83 clinical Streptococcus pneumoniae isolates using specific primer pairs.
- Investigation of the genetic organization and distribution of erm(B)-carrying transposons.
Main Results:
- A strong correspondence was found between Tn1545 and Tn6003, differing mainly by an IS1239 insertion in Tn1545.
- Tn6002 was the most prevalent erm(B)-carrying transposon (59 isolates), followed by Tn3872 (18 isolates) and Tn6003 (6 isolates).
- The erm(B)-carrying transposon Tn1545 was not detected in any of the clinical isolates studied.
Conclusions:
- Tn6002 is the predominant erm(B)-carrying Tn916-related element in the studied Italian pneumococcal isolates.
- The genetic organization of erm(B)-carrying transposons in resistant pneumococci shows significant similarity to previously described elements.
- Understanding the distribution of these mobile genetic elements is vital for antimicrobial resistance surveillance.
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