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Published on: September 23, 2021
Performance validation of neural network based (13)c NMR prediction using a publicly available data source
K A Blinov1, Y D Smurnyy, M E Elyashberg
1Advanced Chemistry Development, Moscow Department, 6 Akademik Bakulev Street, Moscow 117513, Russian Federation.
This study validates a neural network algorithm for predicting 13C NMR chemical shifts using the NMRShiftDB database. The algorithm achieved a mean error of 1.59 ppm, demonstrating its predictive accuracy.
Area of Science:
- Computational Chemistry
- Spectroscopy
- Machine Learning
Background:
- 13C NMR spectroscopy is crucial for chemical structure elucidation.
- Accurate prediction of 13C NMR chemical shifts aids in spectral assignment and structure determination.
- Neural network algorithms offer a promising approach for chemical shift prediction.
Purpose of the Study:
- To validate the performance of a neural network-based 13C NMR prediction algorithm.
- To assess prediction accuracy using a large, open-source chemical shift database (NMRShiftDB).
- To compare algorithm performance with and without overlap between training and test data.
Main Methods:
- Validation of a neural network algorithm using NMRShiftDB (ca. 214,000 chemical shifts).
- Analysis of performance on two subsets: 'included shift set' (ca. 121,000 shifts) and 'excluded shift set' (ca. 93,000 shifts).
- Comparison of results with Robien's CNMR Neural Network Predictor.
Main Results:
- The algorithm achieved a mean error of 1.59 ppm across the entire NMRShiftDB.
- Mean deviations were 1.47 ppm for the 'included shift set' and 1.74 ppm for the 'excluded shift set'.
- Performance was comparable to other reported algorithms.
Conclusions:
- The neural network algorithm demonstrates reliable performance for 13C NMR chemical shift prediction.
- The validation using NMRShiftDB provides a robust assessment of the algorithm's accuracy.
- This tool can aid researchers in spectral analysis and structure elucidation.
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