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Published on: March 28, 2017
tmRNA abundance in Streptomyces aureofaciens, S. griseus and S. collinus under stress-inducing conditions
P Palecková1, J Felsberg, J Bobek
1Institute of Alicrobiology, Academy of Sciences of the Czech Republic, 142 20 Prague, Czechia.
Abstract:
tmRNA and protein SmpB are the main components required for rescue of stalled ribosomes incapable of properly elongating or terminating the polypeptide chain. We examined the tmRNA level and protein synthesis in Streptomyces aureofaciens, S. griseus and S. collinus synthesizing tetracycline, streptomycin and kirromycin, respectively, during various stress conditions. Downshift in temperature caused a decrease in protein synthesis but the level of tmRNA increased. Shift up in temperature induced decay of tmRNA in all strains and in S. collinus led to stimulation and in S. aureofaciens and S. griseus to inhibition of protein synthesis. At high NaCl concentrations protein synthesis was inhibited and tmRNA decayed. Shift in pH from 7.0 to 5.0 had no pronounced effect on the tmRNA level while upshift to pH 9.0 in S. collinus and S. aureofaciens caused inhibition of protein synthesis and decay of tmRNA in S. collinus. In contrast, protein synthesis and tmRNA level increased in S. griseus at the alkaline pH. Our data show that tmRNA abundance is important for survival of streptomycetes under certain unfavorable conditions.
Insights
Transfer messenger RNA (tmRNA) levels are crucial for bacterial survival under stress. This study shows tmRNA abundance helps Streptomyces strains adapt to temperature, pH, and salt changes, ensuring protein synthesis.
Area of Science:
- Molecular Biology
- Microbiology
- Bacterial Stress Response
Background:
- Ribosome stalling hinders protein synthesis, requiring rescue mechanisms.
- tmRNA (transfer messenger RNA) and SmpB protein are key for rescuing stalled ribosomes.
Purpose of the Study:
- To investigate the role of tmRNA levels in Streptomyces during various stress conditions.
- To understand how tmRNA abundance affects protein synthesis and bacterial survival under stress.
Main Methods:
- Analyzing tmRNA levels and protein synthesis rates in Streptomyces strains (S. aureofaciens, S. griseus, S. collinus).
- Exposing bacteria to different stress conditions: temperature shifts, high NaCl concentrations, and pH changes.
Main Results:
- Decreased protein synthesis with increased tmRNA during cold shock.
- tmRNA decay and varied protein synthesis responses to heat shock across strains.
- Inhibition of protein synthesis and tmRNA decay under high salt conditions.
- Differential effects of pH shifts on tmRNA levels and protein synthesis.
Conclusions:
- tmRNA abundance is vital for Streptomyces survival under specific environmental stresses.
- The tmRNA system plays a significant role in bacterial adaptation and resilience.
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