Related Experiment Video
Updated: Jul 6, 2026

Enhanced Yeast One-hybrid Screens To Identify Transcription Factor Binding To Human DNA Sequences
Published on: February 11, 2019
FTFD: an informatics pipeline supporting phylogenomic analysis of fungal transcription factors
Jongsun Park1, Jaejin Park, Suwang Jang
1Fungal Bioinformatics Laboratory, Seoul National University, Seoul 151-921, Korea.
Summary:
Genomes of more than 60 fungal species have been sequenced to date, yet there has been no systematic approach to analyze fungal transcription factors (TFs) kingdom widely. We developed a standardized pipeline for annotating TFs in fungal genomes. Resulting data have been archived in a new database termed the Fungal Transcription Factor Database (FTFD). In FTFD, 31,832 putative fungal TFs, identified from 62 fungal and 3 Oomycete species, were classified into 61 families and phylogenetically analyzed. The FTFD will serve as a community resource supporting comparative analyses of the distribution and domain structure of TFs within and across species.
Availability:
All data described in this study can be browsed through the FTFD web site at http://ftfd.snu.ac.kr/.
More Related Videos
07:48Genome-wide Profiling of Transcription Factor-DNA Binding Interactions in Candida albicans: A Comprehensive CUT&RUN Method and Data Analysis Workflow
Published on: April 1, 2022
05:22Investigating Bacterial-Fungal Interactions using Fungal Highway Columns in Diverse Environments and Substrates
Published on: January 24, 2025
Related Concept Videos
Transcription Factors
Transcription Factors
Transcription Elongation Factors
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA into a...
General Transcription Factors
Transcription Elongation Factors
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA into a...
Modern Molecular Taxonomy