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RNA Interference01:23

RNA Interference

RNA interference (RNAi) is a process in which a small non-coding RNA molecule blocks the post-transcriptional expression of a gene by binding to its messenger RNA (mRNA) and preventing the protein from being translated.
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...
Experimental RNAi02:15

Experimental RNAi

RNA interference (RNAi) is a cellular mechanism that inhibits gene expression by suppressing its transcription or activating the RNA degradation process. The mechanism was discovered by Andrew Fire and Craig Mello in 1998 in plants. Today, it is observed in almost all eukaryotes, including protozoa, flies, nematodes, insects, parasites, and mammals. This precise cellular mechanism of gene silencing has been developed into a technique that provides an efficient way to identify and determine the...
Conservative Site-specific Recombination and Phase Variation02:53

Conservative Site-specific Recombination and Phase Variation

Because the DNA segments are cut and reorganized in a direction-specific manner, site-specific recombination has emerged as an efficient genetic engineering technique. Flippase and Cyclization recombinases or Flp and Cre, respectively, are two members of the tyrosine recombinase family derived from bacteriophages, that are used to mediate site-specific DNA insertions, deletions, and targeted expression of proteins in mammalian cell lines.
The recognition sites for Cre recombinase called LoxP...
In-vitro Mutagenesis01:16

In-vitro Mutagenesis

To learn more about the function of a gene, researchers can observe what happens when the gene is inactivated or “knocked out,” by creating genetically engineered knockout animals. Knockout mice have been particularly useful as models for human diseases such as cancer, Parkinson’s disease, and diabetes.

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Related Experiment Video

Updated: Jul 6, 2026

QTL Mapping and CRISPR/Cas9 Editing to Identify a Drug Resistance Gene in Toxoplasma gondii
11:37

QTL Mapping and CRISPR/Cas9 Editing to Identify a Drug Resistance Gene in Toxoplasma gondii

Published on: June 22, 2017

RNA interference as a genetic tool in trypanosomes.

Vivian Bellofatto1, Jennifer B Palenchar

  • 1Department of Microbiology and Molecular Genetics, UMDNJ-NJ Medical School, International Center for Public Health, Newark, NJ, USA.

Methods in Molecular Biology (Clifton, N.J.)
|March 29, 2008
PubMed
Summary

RNA interference (RNAi) is a powerful gene silencing technique used in Trypanosoma brucei research. This study details essential RNAi methods for studying parasite biology and gene function in procyclic forms.

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Area of Science:

  • Molecular Biology
  • Genetics
  • Parasitology

Background:

  • RNA interference (RNAi) is a natural cellular mechanism for gene silencing.
  • Many pathogenic trypanosomatids possess innate RNAi machinery.
  • Trypanosoma brucei is a key model organism for studying parasitic diseases.

Purpose of the Study:

  • To detail the methodology for RNAi application in Trypanosoma brucei.
  • To facilitate the study of gene function in situ within this parasite.
  • To address critical questions regarding trypanosome biology.

Main Methods:

  • Parasite cell culture of Trypanosoma brucei procyclic forms.
  • DNA transfection for introducing RNAi constructs.
  • Induction and execution of RNAi experiments for gene knockdown.

Main Results:

  • Successful implementation of RNAi for gene expression reduction in Trypanosoma brucei.
  • Demonstration of RNAi as a viable tool for in vivo functional genomics.
  • Established protocols applicable to procyclic forms.

Conclusions:

  • RNAi is a highly effective tool for functional genomics in Trypanosoma brucei.
  • The described methods enable in-depth investigation of parasite biology.
  • This approach aids in understanding diseases caused by trypanosomes.