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Characterize Disease-related Mutants of RAF Family Kinases by Using a Set of Practical and Feasible Methods
Published on: July 17, 2019
Raf kinase inhibitor protein: mechanism of loss of expression and association with genomic instability
F Al-Mulla1, S Hagan, W Al-Ali
1Department of Pathology, Molecular Pathology Unit, Faculty of Medicine, Kuwait University, Kuwait. fahd@al-mulla.org
Aims:
Raf kinase inhibitory protein (RKIP; also known as PEBP, for phosphatidylethanolamine-binding protein) is an endogenous inhibitor of the Raf- MAPK kinase (MEK)-MAP kinase pathway. It has emerged as a significant metastasis suppressor in a variety of human cancers including colorectal cancer (CRC) and was recently shown to regulate the spindle checkpoint in cultured cells. This study aims at correlating RKIP expression with chromosomal instability in colorectal cancer samples and identifies possible mechanisms of RKIP loss.
Methods:
Chromosomal instability was assessed using metaphase-based comparative genomic hybridisation (CGH) and loss of heterozygosity (LOH) in 65 cases with microsatellite stable CRC and correlated with RKIP expression. Methyl-specific PCR was used on DNA extracted from 82 cases with CRC to determine CpG methylation status at the RKIP promoter and the results correlated with RKIP protein expression.
Results:
We demonstrate for the first time that in microsatellite stable (MSS) CRC, the number of chromosomal losses is inversely proportional to RKIP expression levels. We also show that methylation of the RKIP promoter is a major mechanism by which RKIP expression is silenced in CRC.
Conclusions:
RKIP loss by hypermethylation of its promoter could have a significant influence on colorectal cancer aneuploidy, which might explain its association with metastatic progression.
Insights
Loss of Raf kinase inhibitory protein (RKIP) in colorectal cancer is linked to increased chromosomal instability. Promoter methylation is a key mechanism causing RKIP silencing, potentially driving cancer metastasis.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Raf kinase inhibitory protein (RKIP) inhibits the Raf-MAPK pathway and acts as a metastasis suppressor in various cancers, including colorectal cancer (CRC).
- RKIP regulates the spindle checkpoint in cultured cells, suggesting a role in chromosomal stability.
Purpose of the Study:
- To correlate RKIP expression with chromosomal instability in colorectal cancer (CRC) samples.
- To identify mechanisms responsible for RKIP loss in CRC.
Main Methods:
- Comparative genomic hybridization (CGH) and loss of heterozygosity (LOH) assessed chromosomal instability in 65 microsatellite-stable (MSS) CRC cases.
- Methyl-specific PCR analyzed RKIP promoter CpG methylation in 82 CRC cases, correlating results with RKIP protein expression.
Main Results:
- A significant inverse correlation was found between chromosomal losses and RKIP expression in MSS CRC.
- RKIP promoter hypermethylation was identified as a primary mechanism for RKIP gene silencing in CRC.
Conclusions:
- RKIP promoter hypermethylation contributes to aneuploidy in colorectal cancer.
- Loss of RKIP may significantly influence metastatic progression in CRC.
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