Related Experiment Video
Updated: Jul 6, 2026

08:46
Determining the Ice-binding Planes of Antifreeze Proteins by Fluorescence-based Ice Plane Affinity
Published on: January 15, 2014
Proton order in the ice crystal surface
V Buch1, H Groenzin, I Li
1The Fritz Haber Institute for Molecular Dynamics, Hebrew University, Jerusalem 91904, Israel.
Summary
This study reveals the ice surface structure, finding a striped pattern of dangling atoms is energetically favored over disorder. This structure influences how molecules interact with ice, impacting atmospheric and planetary chemistry.
Area of Science:
- Surface science
- Computational chemistry
- Physical chemistry
Background:
- The atomic-level structure of pristine ice surfaces at low temperatures remains poorly understood.
- Understanding ice surface physics is crucial for terrestrial and planetary chemistry, particularly regarding adsorbate interactions.
Purpose of the Study:
- To investigate the atomic-level structure of dangling hydrogen (H) and oxygen (O) atoms at the basal ice surface.
- To determine the preferred arrangement of these dangling atoms and their implications for adsorbate binding.
Main Methods:
- Extensive computer simulations using two different empirical potentials.
- Free energy calculations to compare different surface structures.
Main Results:
- Simulations indicate a significant free energy preference for a striped phase with alternating rows of dangling H and dangling O atoms.
- This striped phase model aligns with previously unexplained experimental helium diffraction data.
- The striped model improves agreement with experimental ppp-polarized sum frequency generation spectra compared to a disordered model.
Conclusions:
- The basal ice surface exhibits a striped phase of dangling atoms, not the expected disordered pattern.
- This finding provides a more accurate model for ice surface structure and adsorbate interactions.
- The striped phase has implications for understanding chemical processes on ice in various environments.
Related Concept Videos
Ionic Crystal Structures
Ionic crystals consist of two or more different kinds of ions that usually have different sizes. The packing of these ions into a crystal structure is more complex than the packing of metal atoms that are the same size.
Most monatomic ions behave as charged spheres, and their attraction for ions of opposite charge is the same in every direction. Consequently, stable structures for ionic compounds result (1) when ions of one charge are surrounded by as many ions as possible of the opposite...
Most monatomic ions behave as charged spheres, and their attraction for ions of opposite charge is the same in every direction. Consequently, stable structures for ionic compounds result (1) when ions of one charge are surrounded by as many ions as possible of the opposite...
Newman Projections
Different notations are used to represent the three-dimensional structure of molecules on two-dimensional surfaces. One of the most commonly used representations is the dash-wedge formula. The dashed wedges, solid wedges, and the plane lines indicate the groups situated behind the plane, coming out of the plane, and in the plane, respectively.
The organic molecules rotate across the single bonds leading to numerous temporary three-dimensional structures of varying energy known as conformers.
The organic molecules rotate across the single bonds leading to numerous temporary three-dimensional structures of varying energy known as conformers.
Fischer Projections
Learning to draw Fischer projections of molecules and understanding their relevance plays a crucial role in the visual depiction of organic molecules. A Fischer projection is a two-dimensional projection on a planar surface to simplify the three-dimensional wedge–dash representation of molecules. This is especially helpful in the case of molecules with multiple chiral centers that can be difficult to draw. Here, all the bonds of interest are represented as horizontal or vertical lines. While...
Proton (¹H) NMR: Chemical Shift
Organic molecules primarily contain carbon and hydrogen atoms. While all the hydrogen isotopes are NMR-active, protium or hydrogen-1 is the most abundant. It has a significant energy separation between its nuclear spin states due to its large gyromagnetic ratio. As per Boltzmann's distribution, an increase in the energy separation implies a greater excess population of nuclei available for excitation, resulting in a strong NMR absorption signal.
Absorption signals of all the protium nuclei in a...
Absorption signals of all the protium nuclei in a...
Intermolecular Forces
Atoms and molecules interact through bonds (or forces): intramolecular and intermolecular. The forces are electrostatic as they arise from interactions (attractive or repulsive) between charged species (permanent, partial, or temporary charges) and exist with varying strengths between ions, polar, nonpolar, and neutral molecules. The different types of intermolecular forces are ion–dipole, dipole–dipole, hydrogen bonds, and dispersion; among these, dipole–dipole, hydrogen bonds, and dispersion...
Molecular Orbital Theory II
Molecular Orbital Energy Diagrams

