Related Experiment Video
Updated: Jul 6, 2026

10:07
Identification of Post-translational Modifications of Plant Protein Complexes
Published on: February 22, 2014
Structural bases for recognition of Anp32/LANP proteins
Cesira de Chiara1, Rajesh P Menon, Annalisa Pastore
1National Institute for Medical Research, The Ridgeway, London, UK.
The FEBS Journal
|April 16, 2008
Summary
The leucine-rich repeat acidic nuclear protein (Anp32a/LANP) interacts weakly with ataxin-1, suggesting modifications are needed for binding. A new partner, Clip 170/Restin, was identified, impacting microtubule dynamics.
Area of Science:
- Molecular and Cellular Biology
- Protein Interactions
- Structural Biology
Background:
- Anp32a/LANP is a phosphoprotein involved in complex protein interactions.
- Understanding Anp32a/LANP's cellular role requires investigating its interaction modes.
Purpose of the Study:
- To investigate the interaction mechanisms of Anp32a/LANP with its protein partners.
- To determine the binding affinity between the Anp32a LRR domain and the ataxin-1 AXH domain.
- To identify novel Anp32a/LANP interacting proteins.
Main Methods:
- Solution structure determination of the Anp32a N-terminal LRR domain.
- Modeling of Anp32a LRR domain interactions with other proteins.
- Experimental probing of Anp32a LRR and ataxin-1 AXH domain interactions.
- Yeast two-hybrid screening to identify new Anp32a LRR binding partners.
Main Results:
- The Anp32a LRR domain structure was solved.
- Anp32a LRR and ataxin-1 AXH domains exhibit weak millimolar affinity binding.
- A new Anp32a LRR binding partner, Clip 170/Restin, was identified.
- Clip 170/Restin is a microtubule-associated protein involved in regulating microtubule dynamics.
Conclusions:
- Weak binding between isolated Anp32a LRR and ataxin-1 AXH domains suggests the need for additional partners or post-translational modifications for stable interaction.
- The identification of Clip 170/Restin as a novel Anp32a LRR binding partner provides new insights into Anp32a's cellular functions, particularly in microtubule regulation.
- Anp32a's interaction with Clip 170/Restin may have implications for understanding human pathologies associated with microtubule dysfunction.
Related Concept Videos
Nuclear Localization Signals and Import
Proteins targeted to the nucleus carry short stretches of amino acid sequences called the nuclear localization signal or NLS. Classical nuclear localization signals are of two types: monopartite and bipartite NLS. Monopartite classical NLS (cNLS) consists of a single cluster of 4-8 amino acids. Bipartite cNLS consists of two clusters of 2-3 amino acids and a 9-12 residue long proline-rich linker bridging the two clusters. Signal clusters are rich in positively charged amino acids such as...
Conserved Binding Sites
Many proteins’ biological role depends on their interactions with their ligands, small molecules that bind to specific locations on the protein known as ligand-binding sites. Ligand-binding sites are often conserved among homologous proteins as these sites are critical for protein function.
Binding sites are often located in large pockets, and if their location on a protein’s surface is unknown, it can be predicted using various approaches. The energetic method computationally analyses the...
Binding sites are often located in large pockets, and if their location on a protein’s surface is unknown, it can be predicted using various approaches. The energetic method computationally analyses the...
Tail-anchoring of Proteins in the ER Membrane
Tail-anchored, or TA, proteins are estimated to make up to 3-5% of membrane proteins found in the eukaryotic cell. Such proteins have a single transmembrane domain located approximately 30 amino acid residues upstream from the C-terminal end. As a result, the signal recognition particle (SRP) cannot guide a TA protein to the ER membrane for cotranslational insertion. Hence, they are integrated into the ER membrane post-translationally using their C-terminal end as the anchor. TA proteins...
Assembly of Signaling Complexes
Multiprotein signaling complexes are formed in a dynamic process involving protein-protein interactions at the cytoplasmic domain of transmembrane receptors or enzymatic and non-enzymatic proteins associated with the receptor. These complexes ensure the activation and propagation of intracellular signals that regulate cell functions.
Interaction domains in cell signaling
Interaction domains recognize exposed features of their binding partners containing post-translationally modified sequences,...
Interaction domains in cell signaling
Interaction domains recognize exposed features of their binding partners containing post-translationally modified sequences,...
Lipids as Anchors
In the plasma membrane, the lipids forming the bilayer can also act as an anchor to tether proteins to the membrane. The three main types of lipid anchors found in eukaryotes are – prenyl groups, fatty acyl groups, and glycosylphosphatidylinositol or GPI groups. Prenyl and fatty acyl groups act as anchors on the cytosolic surface of the membrane, whereas GPI anchors proteins on the extracellular side.
The carboxy-terminal of most of the prenylated proteins, such as Ras proteins, contains the...
The carboxy-terminal of most of the prenylated proteins, such as Ras proteins, contains the...
Regulation of Nuclear Protein Sorting
Nuclear protein sorting regulates nucleus composition and gene expression, crucial for determining the fate of a eukaryotic cell. Hence, the entry and exit of molecules across the nuclear envelope is a tightly controlled process. Nuclear protein sorting can be inhibited by one of the following ways: 1) masking cargo signal sequences, 2) modifying the nuclear receptor's affinity for cargo, 3) controlling the nuclear pore size, 4) retaining the cargo during its transit to the cytosol or the...

