An alternative transcript from the death-associated protein kinase 1 locus encoding a small protein selectively mediates membrane blebbing
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Characterization of MLKL-mediated Plasma Membrane Rupture in Necroptosis
Published on: August 7, 2018
Yao Lin1, Craig Stevens, Roman Hrstka
1Institute of Genetics and Molecular Medicine, Cell Signalling Unit, CRUK p53 Signal Transduction Group, University of Edinburgh, UK.
Abstract:
Death-associated protein kinase 1 (DAPK-1) is a multidomain protein kinase with diverse roles in autophagic, apoptotic and survival pathways. Bioinformatic screens were used to identify a small internal mRNA from the DAPK-1 locus (named s-DAPK-1). This encodes a 295 amino acid polypeptide encompassing part of the ankyrin-repeat domain, the P-loop motifs, part of the cytoskeletal binding domain of DAPK-1, and a unique C-terminal 'tail' extension not present in DAPK-1. Expression of s-DAPK-1 mRNA was detected in a panel of normal human tissues as well as primary colorectal cancers, indicating that its expression occurs in vivo. s-DAPK-1 gene transfection into cells produces two protein products: one with a denatured mass of 44 kDa, and a smaller product of 40 kDa. Double alanine mutation of the C-terminal tail extension of s-DAPK-1 (Gly296/Arg297) prevented production of the 40 kDa fragment, suggesting that the smaller product is generated by in vivo proteolytic processing. The s-DAPK-1 gene cannot substitute for full-length DAPK-1 in an mitogen-activated protein kinase kinase/extracellular signal-regulated kinase-dependent apoptotic transfection assay. However, the transfection of s-DAPK-1 was able to mimic full-length DAPK-1 in the induction of membrane blebbing. The 44 kDa protease-resistant mutant s-DAPK-1G296A/R297A had very low activity in membrane blebbing, whereas the 40 kDa s-DAPK-1Deltatail protein exhibited the highest levels of membrane blebbing. Deletion of the tail extension of s-DAPK-1 increased its half-life, shifted the equilibrium of the protein from cytoskeletal to soluble cytosolic pools, and altered green fluorescent protein-tagged s-DAPK-1 protein localization as observed by confocal microscopy. These data highlight the existence of an alternative product of the DAPK-1 locus, and suggest that proteolytic removal of the C-terminal tail of s-DAPK-1 is required to stimulate maximally its membrane-blebbing function.
Insights
A novel, smaller Death-associated protein kinase 1 (DAPK-1) variant, s-DAPK-1, is expressed in human tissues and cancers. Proteolytic processing of s-DAPK-1 enhances its membrane-blebbing function.
Area of Science:
- Molecular Biology
- Cell Biology
- Biochemistry
Background:
- Death-associated protein kinase 1 (DAPK-1) is a key regulator of cellular processes including apoptosis and autophagy.
- The DAPK-1 locus has been identified as a source of alternative mRNA transcripts.
- Understanding alternative splicing and protein variants is crucial for comprehending kinase function in normal and disease states.
Purpose of the Study:
- To identify and characterize a novel, smaller variant of DAPK-1 (s-DAPK-1) originating from the DAPK-1 locus.
- To investigate the expression pattern and functional properties of s-DAPK-1.
- To elucidate the role of the C-terminal tail in s-DAPK-1 processing and function.
Main Methods:
- Bioinformatic screening to identify novel mRNA transcripts.
- RT-PCR and Western blotting to detect s-DAPK-1 mRNA and protein expression in human tissues and cancer cell lines.
- Site-directed mutagenesis to investigate the role of the C-terminal tail in protein processing.
- Cell-based assays to assess membrane blebbing activity and protein localization.
Main Results:
- A novel 295 amino acid polypeptide, s-DAPK-1, was identified from the DAPK-1 locus, expressed in normal tissues and colorectal cancers.
- s-DAPK-1 transfection yielded 44 kDa and 40 kDa protein products, with the smaller fragment generated by proteolytic processing dependent on the C-terminal tail.
- s-DAPK-1 mimicked DAPK-1 in inducing membrane blebbing, with the 40 kDa processed form showing maximal activity; proteolytic removal of the tail enhanced protein stability and altered localization.
Conclusions:
- The DAPK-1 locus produces an alternative mRNA, s-DAPK-1, encoding a distinct protein variant.
- Proteolytic processing of s-DAPK-1, involving the C-terminal tail, is essential for its maximal membrane-blebbing function.
- s-DAPK-1 represents a functionally relevant DAPK-1 variant with implications for cellular signaling pathways.
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