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Related Concept Videos

DNA Isolation01:24

DNA Isolation

DNA isolation protocols can be fast and straightforward or complex and time-consuming depending on the type and quality of DNA required for further processing. For example, plasmid DNA extraction is a bit more complicated than genomic DNA extraction because of the need for an appropriate lysis method to separate plasmid DNA from gDNA during isolation. However, for specific applications, such as long-range DNA sequencing that require a good yield of high- quality DNA samples, we need to follow...
Sanger Sequencing01:57

Sanger Sequencing

DNA sequencing is a fundamental technique that is routinely used in the biological sciences. This method can be applied to a range of questions at different scales - from the sequencing of a cloned DNA fragment or the study of a mutation in a gene up to whole-genome sequencing. However, despite the widespread use of sequencing today, it was not until 1977 that Fredrick Sanger and his collaborators developed the chain-termination method to decode DNA sequences. It relies on the separation of a...
Maxam-Gilbert Sequencing01:05

Maxam-Gilbert Sequencing

In the same year as the discovery of the Sanger sequencing method, another group of scientists, Allan Maxam and Walter Gilbert, demonstrated their chemical-cleavage method for DNA sequencing. The Maxam-Gilbert method relies on using different chemicals that can cleave the DNA sequence at specific sites, the separation of resulting DNA fragments of variable size using electrophoresis, and deciphering the DNA sequence from the resulting gel bands.
Challenges of the Maxam-Gilbert Method
The...
Single-Strand DNA Binding Proteins01:03

Single-Strand DNA Binding Proteins

For successful DNA replication, the unwinding of double-stranded DNA must be accompanied by stabilization and protection of the separated single strands of the DNA. This crucial task is performed by single-strand DNA-binding (SSB) proteins. They bind to the DNA in a sequence-independent manner, which means that the nitrogenous bases of the DNA need not be present in a specific order for binding of SSB proteins to it. The binding of SSB proteins straightens single-stranded DNA (ssDNA) and makes...

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Related Experiment Video

Updated: Jul 5, 2026

Stable DNA Motifs, 1D and 2D Nanostructures Constructed from Small Circular DNA Molecules
09:32

Stable DNA Motifs, 1D and 2D Nanostructures Constructed from Small Circular DNA Molecules

Published on: April 12, 2019

Chemical and enzymatic methods for preparing circular single-stranded DNAs.

A M Diegelman1, E T Kool

  • 1University of Rochester, Rochester, New York, USA.

Current Protocols in Nucleic Acid Chemistry
|April 23, 2008
PubMed
Summary
This summary is machine-generated.

Researchers developed simple "one-pot" methods for synthesizing small circular oligonucleotides. These DNA molecules are valuable for diagnostics, therapeutics, and as catalysts for nucleic acid synthesis.

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Last Updated: Jul 5, 2026

Stable DNA Motifs, 1D and 2D Nanostructures Constructed from Small Circular DNA Molecules
09:32

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Published on: April 12, 2019

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A Droplet-Based Microfluidic Approach and Microsphere-PCR Amplification for Single-Stranded DNA Amplicons
11:40

A Droplet-Based Microfluidic Approach and Microsphere-PCR Amplification for Single-Stranded DNA Amplicons

Published on: November 14, 2018

Area of Science:

  • Molecular Biology
  • Synthetic Chemistry
  • Biotechnology

Background:

  • Small circular oligonucleotides exhibit unique binding properties with RNA and DNA.
  • These molecules are increasingly recognized for their potential in various scientific applications.
  • Synthetic circular DNA can function as a catalyst in nucleic acid amplification.

Purpose of the Study:

  • To present efficient methods for the synthesis of small circular oligonucleotides.
  • To highlight the utility of these circular DNA molecules in laboratory settings.
  • To describe simple, scalable procedures for oligonucleotide cyclization.

Main Methods:

  • Utilizing short DNA splints to facilitate circularization.
  • Employing "one-pot" procedures for synthesis.
  • Chemical or enzymatic ligation for circle formation.

Main Results:

  • Successful synthesis of small circular oligonucleotides using the described methods.
  • Demonstration of the simplicity and efficiency of the "one-pot" approach.
  • Confirmation of the utility of DNA splints in holding linear precursors for ligation.

Conclusions:

  • The presented methods offer a straightforward route to synthesize small circular oligonucleotides.
  • These synthetic molecules hold significant promise for diagnostic and therapeutic applications.
  • The catalytic properties of circular DNA in nucleic acid synthesis are further supported.