Related Experiment Video
Updated: Jul 5, 2026

15:13
High-resolution Spatiotemporal Analysis of Receptor Dynamics by Single-molecule Fluorescence Microscopy
Published on: July 25, 2014
Diffusion-influenced reactions of particles with several active sites
Konstantin L Ivanov1, Nikita N Lukzen
1International Tomography Center, Institutskaya 3a, Novosibirsk, Russia. ivanov@tomo.nsc.ru
The Journal of Chemical Physics
|April 25, 2008
Summary
This study presents formulas for calculating reaction rates in liquid-phase reactions with multiple active sites. The findings enable accurate prediction of reaction kinetics for complex molecular interactions.
Area of Science:
- Chemical Kinetics
- Physical Chemistry
- Computational Chemistry
Background:
- Understanding sterically specific liquid-phase reactions is crucial in chemistry.
- Reactions involving reactants with multiple active sites present unique challenges in rate prediction.
- Existing models may not fully capture the complexities of multi-site interactions.
Purpose of the Study:
- To develop a theoretical framework for analyzing sterically specific liquid-phase reactions with multi-site reactants.
- To derive accurate formulas for partial rate constants of individual active sites.
- To investigate the mutual influence of active sites on overall reaction rates.
Main Methods:
- Application of kinematic approximation to derive rate equations.
- Formulation of reaction rates using kinetic rate constants and Green function convolutions.
- Analysis of arbitrary reactant and active site geometries.
Main Results:
- Compact formulas for partial rate constants of individual active sites were derived.
- Reaction rates are expressed via kinetic rate constants and Green function convolutions over reaction zones.
- The derived formulas are applicable to any geometry of reactants and active sites.
- The mutual influence of active sites was studied and a simple estimation method was proposed.
Conclusions:
- The developed formulas provide a robust method for calculating reaction rates in complex liquid-phase systems.
- This work offers a valuable tool for predicting reaction kinetics involving multi-site molecules.
- The findings contribute to a deeper understanding of steric effects in chemical reactions.
Related Concept Videos
Predicting Reaction Outcomes
Kinetics describes the rate and path by which a reaction occurs. In contrast, thermodynamics deals with state functions and describes the properties, behavior, and components of a system. It is not concerned with the path taken by the process and cannot address the rate at which a reaction occurs. Although it does provide information about what can happen during a reaction process, it does not describe the detailed steps of what appears on an atomic or a molecular level. On the other hand,...
Passive Diffusion: Overview and Kinetics
Passive diffusion is a critical process that allows small lipophilic drugs to cross the cell membrane along a concentration gradient. This mechanism's efficiency depends on four primary factors: the membrane's surface area, the drug's lipid-water partition coefficient, the concentration gradient, and the membrane's thickness.
When administered orally, drugs establish a substantial concentration gradient between the gastrointestinal (GI) lumen and the bloodstream, expediting their diffusion into...
When administered orally, drugs establish a substantial concentration gradient between the gastrointestinal (GI) lumen and the bloodstream, expediting their diffusion into...
Fast Reactions
Fast reactions occurring in times shorter than the time needed to mix reactants pose a unique challenge for investigation. In a liquid-phase continuous-flow system, reactants A and B are swiftly pushed into the mixing chamber, where mixing occurs within 1 ms. The reaction mixture then flows through an observation tube, and one measures light absorption to determine species concentrations at various points of the tube. This method is most appropriate when relatively large volumes of reactants...
Diffusion
Diffusion is a type of passive transport. In passive transport, a substance tends to move from an area of high concentration to an area of low concentration until the concentration is equal across the space. For example, take the diffusion of substances through the air. When someone opens a perfume bottle in a room filled with people, the perfume is at its highest concentration in the bottle and is at its lowest at the edges of the room. The perfume vapor will diffuse, or spread away, from the...
Diffusion
Diffusion is the passive movement of substances down their concentration gradients—requiring no expenditure of cellular energy. Substances, such as molecules or ions, diffuse from an area of high concentration to an area of low concentration in the cytosol or across membranes. Eventually, the concentration will even out, with the substance moving randomly but causing no net change in concentration. Such a state is called dynamic equilibrium, which is essential for maintaining overall...
Factors Influencing the Rate of Chemical Reactions
A variety of factors influence the rate of chemical reactions. For a chemical reaction to happen, atoms must collide with enough energy to overcome the repulsion between their electrons. This energy is called activation energy. Factors influencing the rate of reaction either lower the activation energy or increase the likelihood of a successful collision.
Concentration and Pressure:
The more particles present within a given space, the more likely those particles are to bump into one another.
Concentration and Pressure:
The more particles present within a given space, the more likely those particles are to bump into one another.

