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Updated: Jul 5, 2026

Defining Substrate Specificities for Lipase and Phospholipase Candidates
Published on: November 23, 2016
The lytic cassette of mycobacteriophage Ms6 encodes an enzyme with lipolytic activity
Filipa Gil1, Maria João Catalão1, José Moniz-Pereira1
1Unidade dos Retrovirus e Infecções Associadas, Centro de Patogénese Molecular, Faculty of Pharmacy, University of Lisbon, Portugal.
Abstract:
dsDNA bacteriophages use the dual system endolysin-holin to achieve lysis of their bacterial host. In addition to these two essential genes, some bacteriophages encode additional proteins within their lysis module. In this report, we describe the activity of a protein encoded by gene lysB from the mycobacteriophage Ms6. lysB is localized within the lysis cassette, between the endolysin gene (lysA) and the holin gene (hol). Analysis of the deduced amino acid sequence of LysB revealed the presence of a conserved motif (Gly-Tyr-Ser-Gln-Gly) characteristic of enzymes with lipolytic activity. A blast search within the sequences of protein databases revealed significant similarities to other putative proteins that are encoded by mycobacteriophages only, indicating that LysB and those proteins may be specific to their mycobacterial hosts. A screening for His(6)-LysB activity on esterase and lipase substrates confirmed the lipolytic activity. Examination of the kinetic parameters of recombinant His(6)-LysB for the hydrolysis of p-nitrophenyl esters indicated that although this protein could use a wide range of chain length substrates (C(4)-C(18)), it presents a higher affinity for p-nitrophenyl esters of longer chain length (C(16) and C(18)). Using p-nitrophenyl butyrate as a substrate, the enzyme showed optimal activity at 23 degrees C and pH 7.5-8.0. Activity was increased in the presence of Ca(2+) and Mn(2+). To the best of our knowledge, this is the first description of a protein with lipolytic activity encoded within a bacteriophage.
Insights
This study identifies LysB, a novel lipolytic enzyme encoded by mycobacteriophage Ms6. This bacteriophage protein exhibits esterase activity, offering new insights into phage-host interactions and lysis mechanisms.
Area of Science:
- Microbiology
- Molecular Biology
- Enzymology
Background:
- Bacteriophages employ endolysin-holin systems for bacterial host lysis.
- Some bacteriophages encode additional proteins within their lysis modules.
- The function of these additional lysis proteins is often uncharacterized.
Purpose of the Study:
- To characterize the function of the lysB gene product from mycobacteriophage Ms6.
- To investigate the enzymatic activity and properties of the LysB protein.
- To explore the potential role of LysB in bacteriophage-mediated bacterial lysis.
Main Methods:
- Sequence analysis of the lysB gene and deduced LysB protein.
- Biochemical assays to screen for lipolytic and esterase activity using various substrates.
- Kinetic analysis of recombinant His(6)-LysB activity on p-nitrophenyl esters.
- Determination of optimal temperature, pH, and cofactor requirements for LysB activity.
Main Results:
- LysB possesses conserved motifs indicative of lipolytic activity.
- Biochemical screening confirmed LysB's esterase and lipase activity.
- Recombinant His(6)-LysB hydrolyzed a range of p-nitrophenyl esters (C4-C18), with higher affinity for longer chains (C16, C18).
- Optimal LysB activity was observed at 23°C and pH 7.5-8.0, enhanced by Ca(2+) and Mn(2+).
Conclusions:
- LysB is the first described bacteriophage-encoded protein with confirmed lipolytic activity.
- LysB's specific activity suggests a potential role in modifying mycobacterial host cell envelopes during phage infection.
- The discovery of LysB expands our understanding of bacteriophage lysis mechanisms and highlights potential host-specific adaptations.
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