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Published on: August 15, 2025
Genetic diversity of Tn1546-like elements in clinical isolates of vancomycin-resistant enterococci
Kidon Sung1, Saeed A Khan, Mohamed S Nawaz
1Division of Microbiology, National Center for Toxicological Research/FDA, 3900 NCTR Road, Jefferson, AR 72079, USA.
Abstract:
We have investigated the genetic diversity of Tn1546 among 17 vancomycin-resistant enterococci (VRE) isolates of Enterococcus faecium. Most of these multidrug-resistant strains harboured plasmids of 2 kb to >300 kb in size. The vancomycin resistance marker vanA was located on both the plasmid and the chromosomal DNA. VRE isolates 18 and 22 failed to amplify the orf1-IR(R) and orf2-IR(R) but contained the orf1 and orf2. VRE3 failed to amplify the orf1, orf2, vanR and vanS, but still yielded a larger than expected (4.4 kb vs. 2.3 kb) vanSH amplicon. VRE9, 10, 21 and 22 also yielded larger (5.5 kb) vanSH amplicons; all others yielded 4.0 kb vanSH amplicons. Sequence analysis of the vanSH amplicons from VRE9, 10, 21 and 22 revealed the presence of IS1251 between the vanS and vanH genes in these isolates. The observed vanSH amplicon from VRE3 contained orf31, orf30 and orf29 of the plasmid pRUM followed by the vanHAXYZ region of Tn1546. Translocation of Tn1546 to a pRUM-like plasmid in VRE3 resulted in the loss of its orf1, orf2, vanR and vanS elements and a loss of the orf32 of pRUM, leading to a unique structural arrangement of vanA elements that is hitherto unknown.
Insights
Genetic diversity of Tn1546 in vancomycin-resistant Enterococcus faecium (VRE) was investigated. Unique structural arrangements of vanA elements were identified, including IS1251 insertion and plasmid translocation, revealing novel genetic diversity.
Area of Science:
- Microbiology
- Genetics
- Molecular Biology
Background:
- Vancomycin-resistant enterococci (VRE) are a significant public health concern.
- The Tn1546 transposon is responsible for vancomycin resistance in enterococci.
- Understanding the genetic diversity of Tn1546 is crucial for controlling VRE spread.
Purpose of the Study:
- To investigate the genetic diversity of the Tn1546 transposon in 17 vancomycin-resistant Enterococcus faecium isolates.
- To characterize the structural variations and genetic elements associated with vancomycin resistance.
Main Methods:
- Polymerase chain reaction (PCR) amplification of Tn1546 elements.
- Plasmid DNA extraction and analysis.
- DNA sequencing of vanSH amplicons.
Main Results:
- The vanA resistance gene was found on both plasmid and chromosomal DNA in most VRE isolates.
- Sequence analysis revealed IS1251 insertion between vanS and vanH genes in some isolates.
- A unique structural arrangement of vanA elements was observed in one isolate due to Tn1546 translocation to a pRUM-like plasmid.
Conclusions:
- Significant genetic diversity exists within the Tn1546 transposon among VRE isolates.
- Novel genetic arrangements, including IS1251 insertion and plasmid translocation, contribute to this diversity.
- These findings enhance our understanding of the evolution and dissemination of vancomycin resistance mechanisms.
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