Checkpoints meet the transcription at a novel histone milestone (H3-T11)

Midori Shimada1, Makoto Nakanishi

  • 1Department of Biochemistry and Cell Biology, Medical school, Nagoya City University, Mizuho-ku, Nagoya, Japan.

Insights

DNA damage triggers a novel transcriptional repression mechanism. Checkpoint kinase 1 (Chk1) dissociation from chromatin reduces histone H3-threonine 11 (H3-T11) phosphorylation, inhibiting gene expression to maintain genomic integrity.

Area of Science:

  • Cellular biology
  • Molecular genetics
  • Epigenetics

Background:

  • Eukaryotic cells possess systems like cell cycle arrest, DNA repair, and apoptosis to maintain genomic integrity following DNA damage.
  • Transcriptional regulation, involving activation and repression, plays a crucial role in these cellular responses.
  • While transcriptional activation mechanisms are well-studied, the processes underlying transcriptional repression remain largely unexplored.

Purpose of the Study:

  • To investigate the role of histone modifications in transcriptional repression after DNA damage.
  • To elucidate the mechanism by which DNA damage leads to transcriptional inhibition.
  • To identify novel factors and pathways involved in regulating gene expression in response to DNA damage.

Main Methods:

  • Chromatin immunoprecipitation (ChIP) to assess protein binding to chromatin.
  • Western blotting to detect post-translational modifications like phosphorylation and acetylation.
  • Analysis of histone modifications, specifically H3-T11 phosphorylation and H3-K9 acetylation.
  • Investigating the interaction between checkpoint kinase 1 (Chk1) and histone H3.

Main Results:

  • Phosphorylation of histone H3-threonine 11 (H3-T11), a mark associated with transcriptional activation, is rapidly reduced upon DNA damage.
  • Checkpoint kinase 1 (Chk1) phosphorylates H3-T11 under normal conditions and dissociates from chromatin after DNA damage.
  • Reduced H3-T11 phosphorylation leads to decreased binding of GCN5 to histone H3, resulting in reduced H3-K9 acetylation and transcriptional repression.

Conclusions:

  • H3-T11 phosphorylation is a novel chromatin modification involved in regulating gene expression.
  • DNA damage induces transcriptional repression through a mechanism involving Chk1 dissociation, decreased H3-T11 phosphorylation, and subsequent inhibition of H3-K9 acetylation.
  • This study uncovers a new pathway for transcriptional repression in response to DNA damage, contributing to the understanding of genomic integrity maintenance.

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