The 5' untranslated regions (UTRs) of CCN1, CCN2, and CCN4 exhibit cryptic promoter activity

Bau-Lin Huang1, Lisa M Dornbach, Karen M Lyons

  • 1Department of Oral Biology, School of Dentistry at UCLA, University of California, Los Angeles, Los Angeles, CA, 90095, USA.

Insights

Cellular communication network (CCN) gene 5' untranslated regions (5' UTRs) do not use internal ribosomal entry sites (IRES) for translation. Instead, these CCN 5' UTRs contain cryptic promoters that regulate gene expression under cellular stress.

Area of Science:

  • Molecular Biology
  • Gene Regulation
  • Cellular Stress Response

Background:

  • Cellular communication network (CCN) proteins are matricellular proteins crucial in embryonic and adult tissues, including skeletal systems and tumors.
  • CCNs are expressed during cellular stress, with their long, G/C-rich 5'-untranslated regions (5'-UTRs) previously hypothesized to contain internal ribosomal entry sites (IRES) for cap-independent translation.
  • Recent findings question the activity of previously identified IRES elements, necessitating re-evaluation of CCN translation mechanisms.

Purpose of the Study:

  • To investigate whether the 5'-UTRs of CCN1, CCN2, and CCN4 contain functional IRES elements.
  • To determine the mechanism by which CCN mRNAs are translated under conditions of cellular stress and suppressed cap-dependent translation.

Main Methods:

  • Utilized promoterless and hairpin-containing dicistronic reporter assays to test for IRES activity and cryptic promoter function in CCN 5'-UTRs.
  • Performed in vitro and in vivo translation assays using dicistronic mRNAs.
  • Analyzed cryptic promoter activity in various cell types, including chondrocytes, osteoblasts, and endothelial cells.
  • Identified the core promoter element within the CCN2 5'-UTR.

Main Results:

  • The 5'-UTRs of CCN1, CCN2, and CCN4 lack IRES activity.
  • Cryptic promoter elements were identified within the 5'-UTRs of CCN1, CCN2, and CCN4, initiating transcription.
  • These cryptic promoters demonstrated varying levels of activity across different cell types.
  • No IRES activity was detected in the tested CCN 5'-UTRs, contrary to previous hypotheses.

Conclusions:

  • The long 5'-UTRs of CCN1, CCN2, and CCN4 do not function as IRES elements.
  • Cryptic promoters within these 5'-UTRs play a significant role in regulating CCN gene expression.
  • These findings suggest an alternative mechanism for CCN gene regulation during cellular stress, distinct from IRES-mediated translation.

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