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Adapting Gastrointestinal Organoids for Pathogen Infection and Single Cell Sequencing under Biosafety Level 3 (BSL-3) Conditions
Published on: September 10, 2021
Human bocavirus infection in children hospitalized with acute gastroenteritis in China
Jie-Mei Yu1, Dan-Di Li, Zi-Qian Xu
1National Institute for Viral Disease Control and Prevention, China CDC, Beijing 100052, China.
Insights
Human bocavirus (HBoV) is frequently found in children with gastroenteritis, often alongside other viruses. However, this study found no significant causal link between HBoV infection and gastroenteritis severity in children.
Area of Science:
- Virology
- Pediatrics
- Gastroenterology
Background:
- Human bocavirus (HBoV) initially identified in respiratory infections.
- Increasing detection of HBoV in pediatric gastroenteritis fecal samples.
Purpose of the Study:
- Determine HBoV prevalence in hospitalized children with gastroenteritis across China.
- Investigate potential associations between HBoV and gastroenteritis.
Main Methods:
- Analyzed 1216 fecal samples from children under 5 with acute gastroenteritis.
- Utilized ELISA, RT-PCR, and PCR for pathogen detection.
- Performed phylogenetic analysis of HBoV VP1/VP2 sequences using MEGA software.
Main Results:
- HBoV detected in 67 specimens; 77.6% had co-infections with other common diarrheal viruses.
- No statistically significant difference in clinical severity between rotavirus and HBoV co-infected children versus rotavirus-only infected children.
- Phylogenetic analysis revealed a single genetic lineage of HBoV.
Conclusions:
- HBoV is prevalent in pediatric gastroenteritis cases in China, frequently co-occurring with other viruses.
- No statistically significant causal relationship established between HBoV and gastroenteritis in this pediatric cohort.
Background:
Human bocavirus (HBoV) was first identified in children with acute respiratory-tract infections, but recent studies have revealed that HBoV is also frequently detected in fecal specimens from children with gastroenteritis.
Objectives:
To investigate the prevalence of HBoV in children hospitalized with gastroenteritis in different areas of China.
Study Design:
Employing ELISA, RT-PCR or PCR, we evaluated 1216 fecal samples for common diarrheal agents from children aged less than 5-year-old hospitalized with acute gastroenteritis. MEGA software was used to construct phylogenetic trees of the VP1/VP2 partial sequences of the HBoV genome.
Results:
There were 67 HBoV-positive specimens, 52 (77.6%) were co-infected with rotavirus, norovirus, astrovirus, or enteric adenovirus. Statistical analysis of the clinical data indicated that children infected with both rotavirus and bocavirus did not have more severe clinical symptoms than children infected with rotavirus. The phylogenetic analysis of the VP1/VP2 partial sequences of the HBoV genome revealed a single genetic lineage.
Conclusions:
Despite its high infection rate, there was no statistically significant a causual relationship between HBoV and gastroenteritis in children.
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