Related Experiment Video
Updated: Jul 5, 2026

A Protocol for Computer-Based Protein Structure and Function Prediction
Published on: November 3, 2011
A Bayesian estimator of protein-protein association probabilities
Jason M Gilmore1, Deanna L Auberry, Julia L Sharp
1Pacific Northwest National Laboratory, Battelle Boulevard, Richland, WA 99352, USA.
Unlabelled:
The Bayesian Estimator of Protein-Protein Association Probabilities (BEPro aff3) is a software tool for estimating probabilities of protein-protein association between bait and prey protein pairs using data from multiple-bait, multiple-replicate, protein liquid chromatography tandem mass spectrometry LC-MS/MS affinity isolation experiments.
Availability:
BEPro (3) is public domain software, has been tested on WIndows XP, Linux and Mac OS, and is freely available from http://www.pnl.gov/statistics/BEPro3.
Supplementary Information:
A user guide, example dataset with analysis and additional documentation are included with the BEPro (3) download.
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