Related Experiment Video
Updated: Jul 4, 2026

Investigating the Pathogenesis of MYH7 Mutation Gly823Glu in Familial Hypertrophic Cardiomyopathy using a Mouse Model
Published on: August 8, 2022
Association analysis of CFH, C2, BF, and HTRA1 gene polymorphisms in Chinese patients with polypoidal choroidal
Kelvin Y Lee1, Eranga N Vithana, Ranjana Mathur
1Singapore National Eye Centre, Singapore.
Insights
Genetic variants in CFH and HTRA1 genes are significantly associated with polypoidal choroidal vasculopathy (PCV) risk in Chinese patients. These findings highlight key genetic factors contributing to PCV, a major cause of vision loss.
Area of Science:
- Ophthalmology
- Genetics
- Molecular Biology
Background:
- Polypoidal choroidal vasculopathy (PCV) is a leading cause of exudative maculopathy in Chinese populations.
- Age-related macular degeneration (AMD) is associated with genetic variants in CFH, HTRA1, LOC387715, C2, and BF genes, particularly in Caucasian and Chinese cohorts.
- Understanding the genetic underpinnings of PCV is crucial for identifying at-risk individuals and developing targeted therapies.
Purpose of the Study:
- To investigate the association between specific genetic variants in CFH, HTRA1/LOC387715, C2, and BF genes and the risk of developing PCV in Chinese patients.
- To determine if previously identified AMD-associated genetic factors play a role in the pathogenesis of PCV in this ethnic group.
Main Methods:
- A case-control study was conducted involving 72 Chinese patients diagnosed with PCV and 93 healthy control subjects.
- Genotyping was performed for five single-nucleotide polymorphisms (SNPs) in the CFH gene, two SNPs each in C2 and BF genes, and two variants in the HTRA1 and LOC387715 genes.
- Statistical analyses were performed to assess the association between specific genotypes and PCV risk, adjusting for age and sex.
Main Results:
- Significant associations were found between PCV and CFH variants rs3753394 (P = 0.0015) and rs800292 (P = 0.0045).
- The homozygous TT genotype of rs3753394 conferred a 4.29-fold increased risk of PCV (P = 0.0076).
- Significant differences in genotype frequencies were observed for HTRA1 variant rs11200638 (P = 0.00032) and LOC387715 variant rs10490924 (P = 0.003), with associated increased risks of 4.9-fold and 4.89-fold, respectively.
- No significant associations were found for the CFH Y402H variant (rs1061170) or variants in the BF and C2 genes.
Conclusions:
- Specific single-nucleotide polymorphisms (SNPs) in the CFH gene (rs3753394, rs800292) and the HTRA1 gene (rs11200638) are significantly associated with an increased risk of polypoidal choroidal vasculopathy (PCV) in Chinese patients.
- These genetic markers may serve as important indicators for PCV susceptibility in the Chinese population.
- Further research is warranted to elucidate the functional mechanisms underlying these genetic associations.
Purpose:
Polypoidal choroidal vasculopathy (PCV) is a major cause of serosanguinous maculopathy in Chinese patients with age-related macular degeneration (AMD). Variants in the CFH and HTRA1/LOC387715 genes are strongly associated with AMD in Caucasians and Chinese. Variants in the C2 and BF genes have been found to confer a significantly reduced risk of AMD. This study was undertaken to determine whether these associations occur in Chinese patients with PCV.
Methods:
Patients of Chinese ethnicity with clinically and angiographically diagnosed PCV and normal control subjects were recruited from the Singapore National Eye Centre. Five single-nucleotide polymorphisms (SNPs) in the CFH gene, two each within the C2 and BF genes and two variants located in the LOC387715 and HTRA1 genes, were screened in all patients and control subjects.
Results:
Seventy-two patients with PCV and 93 normal control subjects were studied. A significant association was noted with CFH variants rs3753394 and rs800292 among the PCV cases (P = 0.0015 and P = 0.0045, respectively). Individuals homozygous for the TT genotype of rs3753394 had a significantly higher risk (P = 0.0076) of PCV (OR = 4.29; 95% CI: 1.47-12.50) than those carrying a single copy of the T allele (P = 0.3210; OR = 1.69; 95% CI: 0.60-4.78), after adjustment for such risk factors as age and sex. The genotype frequencies of rs11200638 and rs10490924 in HTRA1 and LOC387715, respectively, were also found to be significantly different between patients with PCV and normal control subjects (P = 0.00032 and P = 0.003, respectively). The AA genotype of rs11200638 and TT genotype of rs10490924 conferred a 4.9-fold (95% CI: 1.85-12.95) and 4.89-fold (95% CI: 1.85-12.90) increased risk of PCV, respectively, after adjustment for age and sex. The Y402H variant of CFH (rs1061170) and the BF and C2 variants were not significantly different in patients and normal control subjects.
Conclusions:
The SNPs rs3753394 and rs800292 of CFH and rs11200638 of HTRA1 are significantly associated with the risk of PCV in Chinese patients.
Related Concept Videos
Pharmacogenomics: Identification of New Drug Targets
Single Nucleotide Polymorphisms-SNPs
Pharmacogenetic Phenotypes: Alterations in Pharmacokinetics, Drug Targets and Biologic Milieu
Genome-wide Association Studies-GWAS
GWAS does not require the identification of the target gene involved in...
Pharmacogenetics of Drug Targets: β₂-Adrenergic Receptors, Apo E, Thymidylate Synthase
Cystic Fibrosis: Pathogenesis
CF is primarily caused by a genetic mutation in a chromosome 7 gene coding for the cystic fibrosis transmembrane conductance regulator (CFTR) protein. The most common gene mutation leading to CF is the ΔF508 mutation, but...
