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Polymorphisms and methylation of the reduced folate carrier in osteosarcoma
Rui Yang1, Jing Qin, Bang H Hoang
1Department of Pediatrics and Molecular Pharmacology, The Albert Einstein College of Medicine, The Children's Hospital at Montefiore, 3415 Bainbridge Avenue, Rosenthal 3rd Floor, Bronx, NY 10467, USA.
Abstract:
High-dose methotrexate is a standard component in the treatment of osteogenic sarcoma. Impaired methotrexate uptake associated with decreased reduced folate carrier expression is a common mechanism of methotrexate resistance in osteogenic sarcoma samples. We investigated whether promoter methylation and polymorphisms in the 3' untranslated region are involved in regulating reduced folate carrier expression. In a cohort of 66 osteogenic sarcoma specimens, quantitative methylation-specific polymerase chain reaction and single-strand conformation polymorphism were performed. We found detectable levels of promoter methylation in 84.3% of samples. When related to the reduced folate carrier mRNA levels, a trend was observed that reduced folate carrier expression is lower in samples (median, 0.7) with greater than 10% DNA methylation as compared with those (median, 2.3) with less than 10% DNA methylation. The heterozygous polymorphisms of 2582 T/G and 2617C/T in the 3' untranslated region showed reduced folate carrier expression (median, 0.9) as compared with the wild-type 2582T and 2617C (median, 4.2). The data suggest promoter methylation and polymorphisms in the 3' untranslated region of the reduced folate carrier may be involved in its transcriptional regulation in osteogenic sarcoma. Further study is required to confirm this finding.
Insights
Promoter methylation and 3' untranslated region polymorphisms in the reduced folate carrier gene may contribute to methotrexate resistance in osteogenic sarcoma by decreasing its expression. This impacts high-dose methotrexate treatment efficacy.
Area of Science:
- Oncology
- Pharmacogenetics
- Molecular Biology
Background:
- High-dose methotrexate is a cornerstone therapy for osteogenic sarcoma.
- Methotrexate resistance, often due to impaired drug uptake, is a significant clinical challenge.
- Reduced folate carrier (RFC) expression is critical for methotrexate transport into cells.
Purpose of the Study:
- To investigate the role of RFC promoter methylation and 3' untranslated region (UTR) polymorphisms in regulating RFC expression in osteogenic sarcoma.
- To determine if these genetic factors contribute to methotrexate resistance mechanisms.
Main Methods:
- Analysis of 66 osteogenic sarcoma specimens.
- Quantitative methylation-specific polymerase chain reaction (PCR) to assess promoter methylation.
- Single-strand conformation polymorphism (SSCP) to identify 3' UTR polymorphisms.
Main Results:
- Detectable promoter methylation was found in 84.3% of osteogenic sarcoma samples.
- A trend indicated lower RFC mRNA levels with increased promoter methylation (>10%).
- Heterozygous 3' UTR polymorphisms (2582 T/G, 2617C/T) were associated with significantly reduced RFC expression compared to wild-type.
Conclusions:
- Promoter methylation and 3' UTR polymorphisms in the RFC gene are potential regulators of RFC expression in osteogenic sarcoma.
- These epigenetic and genetic alterations may contribute to methotrexate resistance.
- Further research is warranted to validate these findings and explore therapeutic implications.
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