Related Experiment Video
Updated: Jul 4, 2026

Shotgun Proteomics Sample Processing Automated by an Open-Source Lab Robot
Published on: October 28, 2021
A shotgun proteomic method for the identification of membrane-embedded proteins and peptides
Adele R Blackler1, Anna E Speers, Mark S Ladinsky
1Department of Pharmacology, University of Colorado School of Medicine, Aurora, Colorado 80045, USA.
Abstract:
Integral membrane proteins perform crucial cellular functions and are the targets for the majority of pharmaceutical agents. However, the hydrophobic nature of their membrane-embedded domains makes them difficult to work with. Here, we describe a shotgun proteomic method for the high-throughput analysis of the membrane-embedded transmembrane domains of integral membrane proteins which extends the depth of coverage of the membrane proteome.
Related Concept Videos
Peptide Identification Using Tandem Mass Spectrometry
This technique helps gather information regarding the protein from which the peptide was obtained and to study the peptides’ amino acid sequence. Identifying peptides from a complex mixture is an important component of the growing field of...
Proteomics
Proteomics is the study of proteomes' function. It involves the large-scale systematic study of the proteome to denote the protein complement expressed by a genome. Scientist Mark Wilkins coined the term proteomics...

