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Frequency of three common mutations of CARD15/NOD2 gene in Iranian IBD patients
Faramarz Derakhshan1, Nosratollah Naderi, Alma Farnood
1Research Center for Gastroenterology and Liver Disease, Shaheed Beheshti University of Medical Sciences, Tehran, Iran.
Insights
The CARD15/NOD2 gene
Area of Science:
- Genetics and Immunology
- Gastroenterology
Background:
- The CARD15/NOD2 gene (IBD1) on chromosome 16 is linked to Inflammatory Bowel Disease (IBD), particularly Crohn's disease.
- Three common CARD15 mutations (R702W, G908R, 1007fsinsC) show variable association with Crohn's disease across ethnic groups.
Purpose of the Study:
- To investigate the frequency of three common CARD15 mutations in Iranian IBD patients.
- To compare mutation frequencies between Iranian Crohn's disease patients, ulcerative colitis patients, and healthy controls.
Main Methods:
- Genotyping of 100 ulcerative colitis patients, 40 Crohn's disease patients, and 100 controls using DNA from leukocytes.
- Polymerase chain reaction and restriction fragment length polymorphism (PCR-RFLP) were employed to detect R702W, G908R, and 1007fsinsC mutations.
Main Results:
- The R702W mutation was significantly more frequent in Iranian Crohn's disease patients (p<0.001, OR 19.21) compared to controls.
- No significant association was found for other CARD15 mutations with Crohn's disease or ulcerative colitis in this population.
Conclusions:
- The R702W mutation of the CARD15 gene is associated with Crohn's disease in the Iranian population.
- This finding highlights the potential role of specific CARD15 variants in the pathogenesis of Crohn's disease within this ethnic group.
Background:
The CARD15/NOD2 gene, located on the pericentromeric region of chromosome 16 (IBD1) has been reported to have an association with IBD, especially Crohn's disease. Three common mutations of CARD15 are variably associated with Crohn's disease in different ethnic groups. We evaluated the frequency of these mutations (R702W, G908R and 1007fsinsC) in Iranian IBD patients and compared it with the healthy control population.
Methods:
One hundred patients with ulcerative colitis, 40 patients with Crohn's disease, and 100 sex- and age-matched controls were enrolled from a tertiary center during a one-year period (2005-2006). The three mutations were assessed in DNA of leukocytes by polymerase chain reaction and restriction fragment length polymorphism (PCR-RFLP).
Results:
The frequency of R702W mutation was significantly higher in Iranian patients with Crohn's disease (p< 0.001; OR 19.21; 95% CI 4.23-87.32) compared to healthy controls. No association was observed between the other mutations and Crohn's disease and none of these mutations was associated with ulcerative colitis.
Conclusion:
The R702W mutation of CARD15 gene was associated with Crohn's disease in the Iranian population.
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