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Updated: Jul 4, 2026

Induction and Validation of Cellular Senescence in Primary Human Cells
Published on: June 20, 2018
YY1 restrained cell senescence through repressing the transcription of p16
Xiuli Wang1, Yunpeng Feng, Liang Xu
1Institute of Genetics and Cytology, Northeast Normal University, Changchun 130024, P.R. China.
Abstract:
The transcription factor YY1 has been implicated to play a role in cell growth control. In this report, we demonstrate that YY1 was able to suppress NCI-H460 cell senescence through regulating the expression of p16(INK4a), a cyclin-dependent kinase inhibitor. We also show that YY1 participated in the repression of p16(INK4a) expression in 293T cells through an epigenetic mechanism involving histone acetylation modification. Specifically, HDAC3 and HDAC4 inhibited the p16(INK4a) promoter activity. The chromatin immunoprecipitation (ChIP) assays verified that HDAC3 and HDAC4 were recruited to p16(INK4a) promoter by YY1. Moreover, co-immunoprecipitation assays revealed that these three protein factors formed a complex. Furthermore, knockdown of these factors induced cell enlargement and flattened morphology and significantly increased the SA-beta-gal activity, a biochemical marker of cell senescence. Overall, data from this study suggest that YY1, HDAC3 and HDAC4 restrained cell senescence by repressing p16(INK4a) expression through an epigenetic modification of histones.
Insights
The transcription factor YY1 suppresses cell senescence by inhibiting p16(INK4a) expression. This involves epigenetic regulation by HDAC3 and HDAC4, revealing a new mechanism controlling cell aging.
Area of Science:
- Molecular Biology
- Epigenetics
- Cell Biology
Background:
- The transcription factor Yin Yang 1 (YY1) is involved in cell growth control.
- Cellular senescence is a key process in aging and tumor suppression.
- p16(INK4a) is a critical inhibitor of cyclin-dependent kinases, regulating cell cycle progression and senescence.
Purpose of the Study:
- To investigate the role of YY1 in regulating NCI-H460 cell senescence.
- To elucidate the mechanism by which YY1 affects p16(INK4a) expression.
- To determine the involvement of epigenetic modifications and histone deacetylases (HDACs) in YY1-mediated senescence suppression.
Main Methods:
- Cell culture (NCI-H460, 293T cells).
- Gene expression analysis (p16(INK4a) regulation).
- Chromatin immunoprecipitation (ChIP) assays to assess protein-DNA interactions.
- Co-immunoprecipitation (Co-IP) assays to detect protein complexes.
- Knockdown experiments to evaluate functional consequences.
- SA-beta-gal staining to quantify senescence.
Main Results:
- YY1 suppresses NCI-H460 cell senescence by downregulating p16(INK4a) expression.
- YY1, HDAC3, and HDAC4 form a complex that represses p16(INK4a) promoter activity via histone acetylation modification.
- Knockdown of YY1, HDAC3, or HDAC4 leads to cell enlargement, altered morphology, and increased SA-beta-gal activity, indicating induced senescence.
Conclusions:
- YY1, in complex with HDAC3 and HDAC4, restrains cell senescence.
- This repression of senescence is achieved by inhibiting p16(INK4a) expression through epigenetic modification of histones.
- The findings uncover a novel epigenetic pathway regulating cellular senescence involving YY1 and specific HDACs.
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