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The role of thyroid hormone receptor DNA binding in negative thyroid hormone-mediated gene transcription
Anne Wulf1, Marianne G Wetzel, Maxim Kebenko
1Zentrum für Experimentelle Medizin, Institut für Biochemie und Molekularbiologie I, Universitätsklinikum Hamburg-Eppendorf, 20246 Hamburg, Germany.
Abstract:
Thyroid hormone 3,3',5-tri-iodothyronine (T3) regulates gene expression in a positive and negative manner. Here, we analyzed the regulation of a positively (mitochondrial glycerol-3-phosphate dehydrogenase) and negatively T3-regulated target gene (TSHalpha). Thyroid hormone receptor (TR) activates mGPDH but not TSH promoter fragments in a mammalian one-hybrid assay. Furthermore, we investigated functional consequences of targeting TR to DNA independent of its own DNA-binding domain (DBD). Using a chimeric fusion protein of the DBD of yeast transcription factor Gal4 with TR, we demonstrated a positive regulation of gene transcription in response to T3. T3-mediated activation of this chimeric protein is further increased after an introduction of point mutations within the DBD of TR. Moreover, we investigated the capacity of TR to negatively regulate gene transcription on a DNA-tethered cofactor platform. A direct binding of TR to DNA via its own DBD is dispensable in this assay. We investigated functional consequences of point mutations affecting different domains of TR. Our data indicate that the DBD of TR plays a key role in direct DNA binding on positively but not on negatively T3-regulated target genes. Nevertheless, the DBD is involved in mediating negative gene regulation independent of its capacity to bind DNA.
Insights
Thyroid hormone receptor (TR) plays distinct roles in gene regulation. Its DNA-binding domain is crucial for activating positively regulated genes but not essential for negatively regulated genes.
Area of Science:
- Molecular Biology
- Endocrinology
- Genetics
Background:
- Thyroid hormone (T3) is a key regulator of gene expression.
- Thyroid hormone receptor (TR) mediates T3's effects.
- TR can activate or repress gene transcription.
Purpose of the Study:
- To investigate the role of TR's DNA-binding domain (DBD) in gene regulation.
- To differentiate TR's function in positive versus negative T3-regulated genes.
- To explore TR's DNA-binding independent functions.
Main Methods:
- Mammalian one-hybrid assay to study TR's interaction with promoter fragments.
- Chimeric protein approach (Gal4-DBD-TR) to target TR to DNA.
- Site-directed mutagenesis to analyze TR domain functions.
- Analysis of T3-regulated genes: mitochondrial glycerol-3-phosphate dehydrogenase (mGPDH) and TSHalpha.
Main Results:
- TR activates mGPDH promoter but not TSHalpha promoter directly.
- A chimeric protein with Gal4-DBD and TR activates transcription in a T3-dependent manner.
- Mutations in TR's DBD enhance T3-mediated activation by the chimeric protein.
- TR can negatively regulate transcription independently of direct DNA binding.
- TR's DBD is critical for positive gene regulation via DNA binding, but not for negative regulation.
Conclusions:
- TR's DBD is essential for direct DNA binding and activation of positively regulated genes.
- TR can mediate negative gene regulation through mechanisms independent of its DNA-binding capacity.
- TR's DBD plays a dual role, being involved in both DNA-binding dependent and independent regulatory functions.
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