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Engineering Artificial Factors to Specifically Manipulate Alternative Splicing in Human Cells
Published on: April 26, 2017
Anticancer drugs affect the alternative splicing of Bcl-x and other human apoptotic genes
Lulzim Shkreta1, Ulrike Froehlich, Eric R Paquet
1Département de Microbiologie et d'Infectiologie, Faculté de Médecine et des Sciences de la Santé, Université de Sherbrooke, 3001 12th Avenue North, Sherbrooke, Quebec, Canada.
Abstract:
Inducing an apoptotic response is the goal of most current chemotherapeutic interventions against cancer. However, little is known about the effect of chemotherapeutic agents on the alternative splicing of apoptotic genes. Here, we have tested 20 of the mainstream anticancer drugs for their ability to influence the production of Bcl-x splice isoforms. We find that many drugs shift splicing toward the proapoptotic Bcl-x(S) splice variant in 293 cells. The drugs modulate splicing decisions most likely through signaling events because the splicing switch is not compromised by inhibiting de novo protein synthesis or the activity of caspases. Several drugs also shift Bcl-x splicing in cancer cell lines (MCF-7, HeLa, PC-3, PA-1, and SKOV-3), but the set of active drugs varies between cell lines. We also examined the effect of anticancer agents on the alternative splicing of 95 other human apoptotic genes in different cell lines. Almost every drug can alter a subset of alternative splicing events in each cell line. Although drugs of the same class often influence the alternative splicing of the same units in individual cell lines, these units differ considerably between cell lines, indicating cell line-specific differences in the pathways that control splicing.
Insights
Many anticancer drugs alter gene splicing, promoting apoptosis by shifting the balance towards the pro-apoptotic Bcl-x(S) variant. This effect occurs through signaling pathways and varies significantly across different cancer cell lines.
Area of Science:
- Molecular Biology
- Cancer Research
- Genetics
Background:
- Chemotherapy aims to induce apoptosis in cancer cells.
- The impact of chemotherapy on alternative splicing of apoptotic genes remains largely unexplored.
- Alternative splicing of Bcl-x (Bcl-xL/Bcl-xS) is crucial in regulating apoptosis.
Purpose of the Study:
- To investigate the effect of mainstream anticancer drugs on the alternative splicing of apoptotic genes, specifically Bcl-x.
- To determine if these drugs modulate splicing through signaling pathways or protein synthesis.
- To assess drug-induced splicing changes in various cancer cell lines and identify cell line-specific responses.
Main Methods:
- Testing 20 mainstream anticancer drugs for their ability to influence Bcl-x splice isoform production in 293 cells.
- Investigating the role of de novo protein synthesis and caspase activity in drug-modulated splicing.
- Analyzing the effect of anticancer agents on the alternative splicing of 95 other human apoptotic genes across multiple cancer cell lines (MCF-7, HeLa, PC-3, PA-1, SKOV-3).
Main Results:
- Many tested drugs shifted Bcl-x splicing towards the pro-apoptotic Bcl-x(S) variant in 293 cells.
- The observed splicing switch was independent of de novo protein synthesis and caspase activity, suggesting modulation via signaling events.
- Several drugs also altered Bcl-x splicing in cancer cell lines, but the active drug set differed among cell lines.
- Nearly all drugs affected alternative splicing of other apoptotic genes in a cell line-specific manner.
- Drugs within the same class often targeted similar splicing events within a specific cell line, but these targets varied considerably between cell lines.
Conclusions:
- Anticancer drugs can significantly influence alternative splicing of apoptotic genes, including Bcl-x.
- Drug-induced splicing modulation likely occurs through cellular signaling pathways.
- Significant cell line-specific differences exist in the response of apoptotic gene splicing to anticancer agents, highlighting the complexity of chemoresistance and drug efficacy.
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