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Updated: Jul 4, 2026

Evaluating the Effectiveness of Cancer Drug Sensitization In Vitro and In Vivo
Published on: February 6, 2015
Topoisomerase levels determine chemotherapy response in vitro and in vivo
Darren J Burgess1, Jason Doles, Lars Zender
1Cold Spring Harbor Laboratory and Howard Hughes Medical Institute, 1 Bungtown Road, Cold Spring Harbor, NY 11724, USA.
Abstract:
Topoisomerase poisons are chemotherapeutic agents that are used extensively for treating human malignancies. These drugs can be highly effective, yet tumors are frequently refractory to treatment or become resistant upon tumor relapse. Using a pool-based RNAi screening approach and a well characterized mouse model of lymphoma, we explored the genetic basis for heterogeneous responses to topoisomerase poisons in vitro and in vivo. These experiments identified Top2A expression levels as major determinants of response to the topoisomerase 2 poison doxorubicin and showed that suppression of Top2A produces resistance to doxorubicin in vitro and in vivo. Analogously, using a targeted RNAi approach, we demonstrated that suppression of Top1 produces resistance to the topoisomerase 1 poison camptothecin yet hypersensitizes cancer cells to doxorubicin. Importantly, lymphomas relapsing after treatment display spontaneous changes in topoisomerase levels as predicted by in vitro gene knockdown studies. These results highlight the utility of pooled shRNA screens for identifying genetic determinants of chemotherapy response and suggest strategies for improving the effectiveness of topoisomerase poisons in the clinic.
Insights
Chemotherapy resistance in cancer can stem from varying topoisomerase levels. This study reveals how targeting topoisomerase 1 (Top1) and topoisomerase 2A (Top2A) impacts drug response, offering new strategies for cancer treatment.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Topoisomerase poisons are crucial chemotherapy agents for treating malignancies.
- Tumor refractoriness and acquired resistance limit the efficacy of these drugs.
- Understanding the genetic basis of heterogeneous responses is vital for improving cancer therapy.
Purpose of the Study:
- To explore the genetic determinants of heterogeneous responses to topoisomerase poisons.
- To identify genetic factors influencing resistance and sensitivity to chemotherapy.
- To investigate strategies for enhancing the effectiveness of topoisomerase poisons.
Main Methods:
- Utilized a pool-based RNA interference (RNAi) screening approach.
- Employed a well-characterized mouse model of lymphoma for in vitro and in vivo studies.
- Conducted targeted RNAi experiments to assess specific topoisomerase gene functions.
Main Results:
- Topoisomerase 2A (Top2A) expression levels significantly determine response to doxorubicin.
- Suppression of Top2A confers resistance to doxorubicin, while Top1 suppression confers resistance to camptothecin.
- Top1 suppression hypersensitizes cancer cells to doxorubicin, and relapsed lymphomas show altered topoisomerase levels.
Conclusions:
- Pooled shRNA screens are effective for identifying genetic determinants of chemotherapy response.
- Altered topoisomerase levels in relapsed lymphomas contribute to treatment resistance.
- Modulating topoisomerase levels presents a potential strategy to improve topoisomerase poison efficacy in cancer treatment.
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