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Updated: Jul 4, 2026

Evaluation of Substrate Ubiquitylation by E3 Ubiquitin-ligase in Mammalian Cell Lysates
Published on: May 10, 2022
Physalin B, a novel inhibitor of the ubiquitin-proteasome pathway, triggers NOXA-associated apoptosis
Isabelle Vandenberghe1, Laurent Créancier, Stéphane Vispé
1Centre de Recherche en Oncologie Expérimentale, Institut de Recherche Pierre Fabre, France.
Abstract:
The ubiquitin-proteasome pathway plays a critical role in the degradation of proteins involved in tumor growth and has therefore become a target for cancer therapy. In order to discover novel inhibitors of this pathway, a cellular assay reporter of proteasome activity was established. Human DLD-1 colon cancer cells were engineered to express a 4 ubiquitin-luciferase (DLD-1 4Ub-Luc) reporter protein, rapidly degraded via the ubiquitin-proteasome pathway and designed DLD-1 4Ub-Luc cells. Following treatment with reference proteasome inhibitors, the 4Ub-Luc protein accumulated in DLD-1 4Ub-Luc cells and a 80-fold increase in luciferase-produced bioluminescence signal was measured, as compared to untreated cells. The screening of over 30,000 compounds using this DLD-1 4Ub-Luc assay led to the identification of physalin B as a novel inhibitor of the ubiquitin-proteasome pathway. Indeed, physalin B induced an increase in bioluminescence from DLD-1 4Ub-Luc cells, at concentrations also producing an accumulation of ubiquitinated proteins and inhibiting TNFalpha-induced NF-kappaB activation. Physalin B did not inhibit catalytic activities of purified proteasome and interfered with cellular proteasomal catalytic activities at 4- to 8-fold higher concentrations than that required to induce significant increase in bioluminescence and accumulation of ubiquitinated proteins in DLD-1 4Ub-Luc cells. Furthermore, physalin B proved to be cytotoxic, triggered apoptosis in DLD-1 4Ub-Luc cells and induced the proapoptotic protein NOXA, characteristic of the proteasome signaling pathway. Therefore, the use of the DLD-1 4Ub-Luc assay allowed the identification of a novel inhibitor of the ubiquitin-proteasome pathway that might interfere with proteasome functions in a different way from reference proteasome inhibitors.
Insights
A novel assay using engineered colon cancer cells identified physalin B as a proteasome inhibitor. This compound disrupts protein degradation, induces apoptosis, and offers a new therapeutic strategy for cancer.
Area of Science:
- Biochemistry
- Molecular Biology
- Cancer Research
Background:
- The ubiquitin-proteasome pathway is crucial for regulating proteins involved in tumor growth, making it a key target for cancer therapies.
- Developing novel inhibitors for this pathway is essential for advancing cancer treatment strategies.
Purpose of the Study:
- To establish a cellular reporter assay for proteasome activity to discover novel pathway inhibitors.
- To identify compounds that inhibit the ubiquitin-proteasome pathway using the developed assay.
Main Methods:
- Engineered human DLD-1 colon cancer cells to express a 4 ubiquitin-luciferase reporter protein (DLD-1 4Ub-Luc).
- Validated the assay by confirming increased bioluminescence and protein accumulation with known proteasome inhibitors.
- Screened over 30,000 compounds using the DLD-1 4Ub-Luc assay.
Main Results:
- Identified physalin B as a novel inhibitor of the ubiquitin-proteasome pathway.
- Physalin B increased bioluminescence, caused ubiquitinated protein accumulation, and inhibited NF-kappaB activation.
- Physalin B demonstrated cytotoxicity, induced apoptosis, and upregulated the proapoptotic protein NOXA in cancer cells.
Conclusions:
- The DLD-1 4Ub-Luc assay is effective for identifying novel ubiquitin-proteasome pathway inhibitors.
- Physalin B represents a promising therapeutic candidate that may act through a distinct mechanism compared to existing proteasome inhibitors.
- This discovery opens avenues for developing new anti-cancer drugs targeting protein degradation pathways.
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