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Updated: Jul 4, 2026

Identification of Novel CK2 Kinase Substrates Using a Versatile Biochemical Approach
Published on: February 21, 2019
The selectivity of inhibitors of protein kinase CK2: an update
Mario A Pagano1, Jenny Bain, Zygmunt Kazimierczuk
1Department of Biological Chemistry and CNR Institute of Neurosciences, University of Padova, viale G. Colombo 3, 35131 Padova, Italy.
Abstract:
CK2 (casein kinase 2) is a very pleiotropic serine/threonine protein kinase whose abnormally high constitutive activity has often been correlated to pathological conditions with special reference to neoplasia. The two most widely used cell permeable CK2 inhibitors, TBB (4,5,6,7-tetrabromo-1H-benzotriazole) and DMAT (2-dimethylamino-4,5,6,7-tetrabromo-1H-benzimidazole), are marketed as quite specific CK2 blockers. In the present study we show, by using a panel of approx. 80 protein kinases, that DMAT and its parent compound TBI (or TBBz; 4,5,6,7-tetrabromo-1H-benzimidazole) are potent inhibitors of several other kinases, with special reference to PIM (provirus integration site for Moloney murine leukaemia virus)1, PIM2, PIM3, PKD1 (protein kinase D1), HIPK2 (homeodomain-interacting protein kinase 2) and DYRK1a (dual-specificity tyrosine-phosphorylated and -regulated kinase 1a). In contrast, TBB is significantly more selective toward CK2, although it also inhibits PIM1 and PIM3. In an attempt to improve selectivity towards CK2 a library of 68 TBB/TBI-related compounds have been tested for their ability to discriminate between CK2, PIM1, HIPK2 and DYRK1a, ending up with seven compounds whose efficacy toward CK2 is markedly higher than that toward the second most inhibited kinase. Two of these, K64 (3,4,5,6,7-pentabromo-1H-indazole) and K66 (1-carboxymethyl-2-dimethylamino-4,5,6,7-tetrabromo-benzimidazole), display an overall selectivity much higher than TBB and DMAT when tested on a panel of 80 kinases and display similar efficacy as inducers of apoptosis.
Insights
The study reveals that common CK2 inhibitors like DMAT are not specific and inhibit other kinases. New compounds, K64 and K66, show improved selectivity for CK2, acting as effective apoptosis inducers.
Area of Science:
- Biochemistry
- Molecular Biology
- Pharmacology
Background:
- Casein kinase 2 (CK2) is a pleiotropic enzyme implicated in neoplasia.
- Existing CK2 inhibitors, TBB and DMAT, are widely used but their specificity is questioned.
Purpose of the Study:
- To evaluate the kinase inhibition profiles of TBB and DMAT.
- To identify novel CK2 inhibitors with improved selectivity.
Main Methods:
- Screening of approximately 80 protein kinases against DMAT, TBB, and related compounds.
- Testing a library of 68 TBB/TBI-related compounds for selectivity against CK2, PIM1, HIPK2, and DYRK1a.
- Assessing apoptosis-inducing efficacy of novel compounds.
Main Results:
- DMAT and TBI inhibit multiple kinases including PIM1, PIM2, PIM3, PKD1, HIPK2, and DYRK1a.
- TBB demonstrates higher selectivity for CK2 but also inhibits PIM1 and PIM3.
- Seven novel compounds showed enhanced CK2 efficacy over other kinases, with K64 and K66 exhibiting superior selectivity and apoptosis-inducing effects compared to TBB and DMAT.
Conclusions:
- DMAT and TBI lack specificity, inhibiting a range of kinases beyond CK2.
- Novel compounds K64 and K66 represent promising, highly selective CK2 inhibitors.
- These new inhibitors hold potential for cancer therapy due to their apoptosis-inducing properties.
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